RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 YTHDC1Q96MU7 727 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 USB1Q9BQ65 265 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 RUSC1Q9BVN2 902 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 SEZ6LQ9BYH1 1024 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 NLRC4Q9NPP4 1024 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 SH3BP1Q9Y3L3 701 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 GJA3Q9Y6H8 435 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 IGF1RP08069 1367 aa6.04□□□□□ -1.44
TOPBP1-210ENST00000572787 TMEM229AB2RXF0 380 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 BHMG1C9JSJ3 638 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 APAF1O14727 1248 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 VAMP4O75379 141 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 MICAL2O94851 1124 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 GJB6O95452 261 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 GSTT1P30711 240 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 WASHC5Q12768 1159 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 GBX1Q14549 363 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 KIF22Q14807 665 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 SEPT2Q15019 361 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 ELF2Q15723 593 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 FAM26DQ5JW98 314 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 MORN1Q5T089 497 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 PRPF40BQ6NWY9 871 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 C16orf54Q6UWD8 224 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 NXPE4Q6UWF7 544 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 RSRC2Q7L4I2 434 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 RPAINQ86UA6 219 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 HSCBQ8IWL3 235 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 CEP120Q8N960 986 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 TNIP3Q96KP6 325 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 KIF2CQ99661 725 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 CCDC8Q9H0W5 538 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 UBP1Q9NZI7 540 aa6.03□□□□□ -1.44
TOPBP1-210ENST00000572787 K7ENM7 598 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 PGRP06401 933 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 FAM153BP0C7A2 387 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 JUNDP17535 347 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 EPHA4P54764 986 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 CCDC85BQ15834 202 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 FNDC3BQ53EP0 1204 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 STRA8Q7Z7C7 330 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 SEPT12Q8IYM1 358 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 OR8H2Q8N162 312 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 NKAPQ8N5F7 415 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 LSM14AQ8ND56 463 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 GIMAP8Q8ND71 665 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 ATRIPQ8WXE1 791 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 RHOVQ96L33 236 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 TARS2Q9BW92 718 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 BCO2Q9BYV7 579 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 KMT5AQ9NQR1 393 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 MAN1C1Q9NR34 630 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 RASSF1Q9NS23 344 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 KLHL11Q9NVR0 708 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 PPT2Q9UMR5 302 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 PHTF1Q9UMS5 762 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 SLC27A5Q9Y2P5 690 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 MAP4K5Q9Y4K4 846 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 TTLL3Q9Y4R7 772 aa6.02□□□□□ -1.45
TOPBP1-210ENST00000572787 GOLGA6L6A8MZA4 724 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 GPR39O43194 453 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 BRINP1O60477 761 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 DDAH1O94760 285 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 ITGBL1O95965 494 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 AGR2O95994 175 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 SETSIPP0DME0 302 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 LMNB1P20700 586 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 IRS1P35568 1242 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 PEX19P40855 299 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 RXRGP48443 463 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 GTF2A2P52657 109 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 C11orf91Q3C1V1 193 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 KMT5BQ4FZB7 885 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 SH3RF1Q7Z6J0 888 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 ETFBKMTQ8IXQ9 262 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 PPM1KQ8N3J5 372 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 NKAIN3Q8N8D7 197 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 IL17REQ8NFR9 667 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 CCDC47Q96A33 483 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 ESF1Q9H501 851 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 SH3GLB2Q9NR46 395 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 INTS7Q9NVH2 962 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 EVA1BQ9NVM1 165 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 DMTF1Q9Y222 760 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 HCN4Q9Y3Q4 1203 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
TOPBP1-210ENST00000572787 ITIH6Q6UXX5 1313 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ABHD14A-ACY1A0A1B0GW23 586 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 A6NCN8 305 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 F5H423 210 aaPredicted RBP6□□□□□ -1.45
TOPBP1-210ENST00000572787 F6X3S4 739 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 J3KRW8 73 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 PLD2O14939 933 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ERC2O15083 957 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 GFRA3O60609 400 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 CCNYL3P0C7X3 344 aa6□□□□□ -1.45
TOPBP1-210ENST00000572787 ARAFP10398 606 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms