RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 NAA16Q6N069 864 aaPredicted RBP19.72■□□□□ 0.75
NDE1-205ENST00000572756 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
NDE1-205ENST00000572756 CSADQ9Y600 493 aa19.72■□□□□ 0.75
NDE1-205ENST00000572756 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
NDE1-205ENST00000572756 PPP4CP60510 307 aa19.71■□□□□ 0.75
NDE1-205ENST00000572756 MAP3K10Q02779 954 aa19.71■□□□□ 0.75
NDE1-205ENST00000572756 ADGRA1Q86SQ6 560 aa19.71■□□□□ 0.75
NDE1-205ENST00000572756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
NDE1-205ENST00000572756 ZKSCAN4Q969J2 545 aaPredicted RBP19.71■□□□□ 0.75
NDE1-205ENST00000572756 CFHR5Q9BXR6 569 aa19.71■□□□□ 0.75
NDE1-205ENST00000572756 ANTXR1Q9H6X2 564 aa19.71■□□□□ 0.75
NDE1-205ENST00000572756 COL2A1P02458 1487 aaPredicted RBP19.71■□□□□ 0.75
NDE1-205ENST00000572756 TESPA1A2RU30 521 aaPredicted RBP19.7■□□□□ 0.74
NDE1-205ENST00000572756 DDTLA6NHG4 134 aaPredicted RBP19.7■□□□□ 0.74
NDE1-205ENST00000572756 SPDYE5A6NIY4 337 aa19.7■□□□□ 0.74
NDE1-205ENST00000572756 IFIT2P09913 472 aaKnown RBP19.7■□□□□ 0.74
NDE1-205ENST00000572756 INPP5BP32019 993 aa19.7■□□□□ 0.74
NDE1-205ENST00000572756 PICALMQ13492 652 aa19.7■□□□□ 0.74
NDE1-205ENST00000572756 MS4A4AQ96JQ5 239 aa19.7■□□□□ 0.74
NDE1-205ENST00000572756 PCDHB15Q9Y5E8 787 aa19.7■□□□□ 0.74
NDE1-205ENST00000572756 IGF2BP3O00425 579 aaKnown RBP eCLIP19.69■□□□□ 0.74
NDE1-205ENST00000572756 IFNL1Q8IU54 200 aa19.69■□□□□ 0.74
NDE1-205ENST00000572756 SH3RF3Q8TEJ3 882 aaPredicted RBP19.69■□□□□ 0.74
NDE1-205ENST00000572756 LRRCC1Q9C099 1032 aa19.69■□□□□ 0.74
NDE1-205ENST00000572756 DCTPP1Q9H773 170 aa19.69■□□□□ 0.74
NDE1-205ENST00000572756 SIPA1L1O43166 1804 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 PHF20L1A8MW92 1017 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 IDH1O75874 414 aaKnown RBP19.68■□□□□ 0.74
NDE1-205ENST00000572756 TBC1D8O95759 1140 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 NOL9Q5SY16 702 aaKnown RBP19.68■□□□□ 0.74
NDE1-205ENST00000572756 ERO1BQ86YB8 467 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 TEX11Q8IYF3 940 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 OTUD5Q96G74 571 aa19.68■□□□□ 0.74
NDE1-205ENST00000572756 OSBPL5Q9H0X9 879 aaPredicted RBP19.68■□□□□ 0.74
NDE1-205ENST00000572756 AATFQ9NY61 560 aaKnown RBP eCLIP19.68■□□□□ 0.74
NDE1-205ENST00000572756 SMARCA5O60264 1052 aaPredicted RBP19.67■□□□□ 0.74
NDE1-205ENST00000572756 BAG3O95817 575 aa19.67■□□□□ 0.74
NDE1-205ENST00000572756 ALDH1A1P00352 501 aa19.67■□□□□ 0.74
NDE1-205ENST00000572756 PLCG2P16885 1265 aa19.67■□□□□ 0.74
NDE1-205ENST00000572756 NOM1Q5C9Z4 860 aaKnown RBP19.67■□□□□ 0.74
NDE1-205ENST00000572756 TMED8Q6PL24 325 aaPredicted RBP19.67■□□□□ 0.74
NDE1-205ENST00000572756 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
NDE1-205ENST00000572756 CRBNQ96SW2 442 aa19.67■□□□□ 0.74
NDE1-205ENST00000572756 PTPN18Q99952 460 aa19.67■□□□□ 0.74
NDE1-205ENST00000572756 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
NDE1-205ENST00000572756 SLURP2P0DP57 97 aa19.66■□□□□ 0.74
NDE1-205ENST00000572756 CYP7A1P22680 504 aa19.66■□□□□ 0.74
NDE1-205ENST00000572756 R3HDMLQ9H3Y0 253 aa19.66■□□□□ 0.74
NDE1-205ENST00000572756 DOCK1Q14185 1865 aa19.66■□□□□ 0.74
NDE1-205ENST00000572756 PHIPQ8WWQ0 1821 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 TBC1D12O60347 775 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 ATP5JP18859 108 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 GTF2A2P52657 109 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 PPATQ06203 517 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 MAP3K12Q12852 859 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 PPIL2Q13356 520 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 TTF1Q15361 905 aaPredicted RBP19.65■□□□□ 0.74
NDE1-205ENST00000572756 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 BRI3BPQ8WY22 251 aa19.65■□□□□ 0.74
NDE1-205ENST00000572756 MYH7P12883 1935 aa19.64■□□□□ 0.74
NDE1-205ENST00000572756 IRF6O14896 467 aa19.64■□□□□ 0.73
NDE1-205ENST00000572756 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
NDE1-205ENST00000572756 BCL11AQ9H165 835 aa19.64■□□□□ 0.73
NDE1-205ENST00000572756 MYH1P12882 1939 aa19.64■□□□□ 0.73
NDE1-205ENST00000572756 FLT1P17948 1338 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 GPR25O00155 361 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 GOLIM4O00461 696 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 CCL15Q16663 113 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
NDE1-205ENST00000572756 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
NDE1-205ENST00000572756 HAUS7Q99871 368 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 BOLA2Q9H3K6 86 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 PTPRFP10586 1907 aa19.63■□□□□ 0.73
NDE1-205ENST00000572756 ATAD5Q96QE3 1844 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 OTUD7BQ6GQQ9 843 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 CERS3Q8IU89 383 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 SCYL3Q8IZE3 742 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 ZNF296Q8WUU4 475 aaPredicted RBP19.62■□□□□ 0.73
NDE1-205ENST00000572756 KCNH4Q9UQ05 1017 aa19.62■□□□□ 0.73
NDE1-205ENST00000572756 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 CTNND1O60716 968 aaKnown RBP19.61■□□□□ 0.73
NDE1-205ENST00000572756 PDE6AP16499 860 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 SNAPC2Q13487 334 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 MAPKAPK5Q8IW41 473 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 RIOK1Q9BRS2 568 aaKnown RBP19.61■□□□□ 0.73
NDE1-205ENST00000572756 MCOLN1Q9GZU1 580 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 DHX36Q9H2U1 1008 aaKnown RBP19.61■□□□□ 0.73
NDE1-205ENST00000572756 PAG1Q9NWQ8 432 aa19.61■□□□□ 0.73
NDE1-205ENST00000572756 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
NDE1-205ENST00000572756 FAM196BA6NMK8 535 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 CETPP11597 493 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 PTPRAP18433 802 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 CRHR2Q13324 411 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 SLC9C2Q5TAH2 1124 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 METTL16Q86W50 562 aaKnown RBP19.6■□□□□ 0.73
NDE1-205ENST00000572756 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
NDE1-205ENST00000572756 ABHD8Q96I13 439 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms