RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SH3BP5LQ7L8J4 393 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 ADGRA1Q86SQ6 560 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
LITAF-208ENST00000571627 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
LITAF-208ENST00000571627 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
LITAF-208ENST00000571627 INPP5BP32019 993 aa17.77■□□□□ 0.44
LITAF-208ENST00000571627 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
LITAF-208ENST00000571627 SH3RF3Q8TEJ3 882 aaPredicted RBP17.77■□□□□ 0.44
LITAF-208ENST00000571627 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
LITAF-208ENST00000571627 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.44
LITAF-208ENST00000571627 DDTLA6NHG4 134 aaPredicted RBP17.76■□□□□ 0.43
LITAF-208ENST00000571627 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
LITAF-208ENST00000571627 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
LITAF-208ENST00000571627 IFIT2P09913 472 aaKnown RBP17.76■□□□□ 0.43
LITAF-208ENST00000571627 IFNL1Q8IU54 200 aa17.76■□□□□ 0.43
LITAF-208ENST00000571627 AATFQ9NY61 560 aaKnown RBP eCLIP17.76■□□□□ 0.43
LITAF-208ENST00000571627 SPDYE5A6NIY4 337 aa17.75■□□□□ 0.43
LITAF-208ENST00000571627 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
LITAF-208ENST00000571627 TEX11Q8IYF3 940 aa17.75■□□□□ 0.43
LITAF-208ENST00000571627 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
LITAF-208ENST00000571627 R3HDMLQ9H3Y0 253 aa17.75■□□□□ 0.43
LITAF-208ENST00000571627 DOCK1Q14185 1865 aa17.75■□□□□ 0.43
LITAF-208ENST00000571627 SIPA1L1O43166 1804 aa17.75■□□□□ 0.43
LITAF-208ENST00000571627 CYP7A1P22680 504 aa17.74■□□□□ 0.43
LITAF-208ENST00000571627 MS4A4AQ96JQ5 239 aa17.74■□□□□ 0.43
LITAF-208ENST00000571627 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
LITAF-208ENST00000571627 PTPN18Q99952 460 aa17.74■□□□□ 0.43
LITAF-208ENST00000571627 ZNF112Q9UJU3 913 aa17.74■□□□□ 0.43
LITAF-208ENST00000571627 ATAD5Q96QE3 1844 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 INHBEP58166 350 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 DYNLL1P63167 89 aaKnown RBP17.73■□□□□ 0.43
LITAF-208ENST00000571627 ERO1BQ86YB8 467 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 MAGEB6Q8N7X4 407 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
LITAF-208ENST00000571627 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
LITAF-208ENST00000571627 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
LITAF-208ENST00000571627 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 BAG3O95817 575 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
LITAF-208ENST00000571627 CCL15Q16663 113 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 BRI3BPQ8WY22 251 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
LITAF-208ENST00000571627 MYH1P12882 1939 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 MYH7P12883 1935 aa17.72■□□□□ 0.43
LITAF-208ENST00000571627 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
LITAF-208ENST00000571627 PHIPQ8WWQ0 1821 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 TESPA1A2RU30 521 aaPredicted RBP17.71■□□□□ 0.43
LITAF-208ENST00000571627 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 GOLIM4O00461 696 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 IRF6O14896 467 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
LITAF-208ENST00000571627 ALDH1A1P00352 501 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 GTF2A2P52657 109 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 PPP4CP60510 307 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 MAP3K12Q12852 859 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 DGKZQ13574 1117 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 TGFBRAP1Q8WUH2 860 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 ZNF296Q8WUU4 475 aaPredicted RBP17.71■□□□□ 0.43
LITAF-208ENST00000571627 MCOLN1Q9GZU1 580 aa17.71■□□□□ 0.43
LITAF-208ENST00000571627 GPR25O00155 361 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 PLCG2P16885 1265 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 PPIL2Q13356 520 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 AAMPQ13685 434 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 NOL9Q5SY16 702 aaKnown RBP17.7■□□□□ 0.42
LITAF-208ENST00000571627 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 ABHD8Q96I13 439 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 CFHR5Q9BXR6 569 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 PTPRFP10586 1907 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 FLT1P17948 1338 aa17.7■□□□□ 0.42
LITAF-208ENST00000571627 IGSF3O75054 1194 aa17.69■□□□□ 0.42
LITAF-208ENST00000571627 MAP3K10Q02779 954 aa17.69■□□□□ 0.42
LITAF-208ENST00000571627 CRHR2Q13324 411 aa17.69■□□□□ 0.42
LITAF-208ENST00000571627 TTF1Q15361 905 aaPredicted RBP17.69■□□□□ 0.42
LITAF-208ENST00000571627 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
LITAF-208ENST00000571627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.69■□□□□ 0.42
LITAF-208ENST00000571627 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.69■□□□□ 0.42
LITAF-208ENST00000571627 NAV1Q8NEY1 1877 aa17.69■□□□□ 0.42
LITAF-208ENST00000571627 ATP5JP18859 108 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 PPATQ06203 517 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 SLC4A8Q2Y0W8 1093 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 OTUD7BQ6GQQ9 843 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
LITAF-208ENST00000571627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.423e-7■■■□□ 18
LITAF-208ENST00000571627 SAP30BPQ9UHR5 308 aaKnown RBP17.68■□□□□ 0.42
LITAF-208ENST00000571627 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
LITAF-208ENST00000571627 CETPP11597 493 aa17.67■□□□□ 0.42
LITAF-208ENST00000571627 PDE6AP16499 860 aa17.67■□□□□ 0.42
LITAF-208ENST00000571627 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
LITAF-208ENST00000571627 CCDC84Q86UT8 332 aaPredicted RBP17.67■□□□□ 0.42
LITAF-208ENST00000571627 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
LITAF-208ENST00000571627 PALD1Q9ULE6 856 aa17.67■□□□□ 0.42
LITAF-208ENST00000571627 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
LITAF-208ENST00000571627 BTBD19C9JJ37 291 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms