RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 SYNE3Q6ZMZ3 975 aa22.81■■□□□ 1.24
RPAIN-210ENST00000571613 NSUN7Q8NE18 718 aaKnown RBP22.81■■□□□ 1.24
RPAIN-210ENST00000571613 MTMR6Q9Y217 621 aa22.81■■□□□ 1.24
RPAIN-210ENST00000571613 GAKO14976 1311 aa22.8■■□□□ 1.24
RPAIN-210ENST00000571613 CHD4Q14839 1912 aa22.8■■□□□ 1.24
RPAIN-210ENST00000571613 GOLGA8BA8MQT2 603 aa22.8■■□□□ 1.24
RPAIN-210ENST00000571613 RRP12Q5JTH9 1297 aaKnown RBP22.8■■□□□ 1.24
RPAIN-210ENST00000571613 CPLX2Q6PUV4 134 aaKnown RBP22.8■■□□□ 1.24
RPAIN-210ENST00000571613 TTLL6Q8N841 843 aa22.8■■□□□ 1.24
RPAIN-210ENST00000571613 RCAN1P53805 252 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 CCT2P78371 535 aaKnown RBP22.79■■□□□ 1.24
RPAIN-210ENST00000571613 PDE4BQ07343 736 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 DIXDC1Q155Q3 683 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 OLFM4Q6UX06 510 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 NFXL1Q6ZNB6 911 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 BRPF3Q9ULD4 1205 aa22.79■■□□□ 1.24
RPAIN-210ENST00000571613 CCDC69A6NI79 296 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 ORC4O43929 436 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 CDKL5O76039 1030 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 GRIK5Q16478 980 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 FOXD4L5Q5VV16 416 aaPredicted RBP22.78■■□□□ 1.24
RPAIN-210ENST00000571613 RGS22Q8NE09 1264 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 FOXD4L4Q8WXT5 416 aaPredicted RBP22.78■■□□□ 1.24
RPAIN-210ENST00000571613 UBAC1Q9BSL1 405 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 PDGFDQ9GZP0 370 aaPredicted RBP22.78■■□□□ 1.24
RPAIN-210ENST00000571613 LY9Q9HBG7 655 aa22.78■■□□□ 1.24
RPAIN-210ENST00000571613 PTPDC1A2A3K4 754 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 VPS37CA5D8V6 355 aaPredicted RBP22.77■■□□□ 1.24
RPAIN-210ENST00000571613 CPLX1O14810 134 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 BTDP43251 543 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 IQCA1Q86XH1 822 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 RTKN2Q8IZC4 609 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 GPHNQ9NQX3 736 aaPredicted RBP22.77■■□□□ 1.24
RPAIN-210ENST00000571613 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 MKRN1Q9UHC7 482 aaKnown RBP22.77■■□□□ 1.24
RPAIN-210ENST00000571613 SLX4Q8IY92 1834 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 ZBTB43O43298 467 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 POLD1P28340 1107 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 WTAPQ15007 396 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 DOK7Q18PE1 504 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 CSPP1Q1MSJ5 1256 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 APOA5Q6Q788 366 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 SH3RF3Q8TEJ3 882 aaPredicted RBP22.77■■□□□ 1.24
RPAIN-210ENST00000571613 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 SLC12A7Q9Y666 1083 aa22.77■■□□□ 1.24
RPAIN-210ENST00000571613 JAK2O60674 1132 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 METAP2P50579 478 aaKnown RBP eCLIP22.76■■□□□ 1.23
RPAIN-210ENST00000571613 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 STRIP1Q5VSL9 837 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 FBXW7Q969H0 707 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 MRIQ9BWK5 157 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 HPS5Q9UPZ3 1129 aa22.76■■□□□ 1.23
RPAIN-210ENST00000571613 MYH2Q9UKX2 1941 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 H3BQV1 296 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 CTDNEP1O95476 244 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 TGFB2P61812 414 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 KIAA2012Q0VF49 1180 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 PPP2R5BQ15173 497 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 CCDC93Q567U6 631 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 IFFO2Q5TF58 517 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 C12orf60Q5U649 245 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 INCENPQ9NQS7 918 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.75■■□□□ 1.23
RPAIN-210ENST00000571613 TACC3Q9Y6A5 838 aa22.75■■□□□ 1.23
RPAIN-210ENST00000571613 HHIPL2Q6UWX4 724 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 TEX11Q8IYF3 940 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 VPS33BQ9H267 617 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 NCOA5Q9HCD5 579 aaKnown RBP22.74■■□□□ 1.23
RPAIN-210ENST00000571613 CCDC196A0A1B0GTZ2 297 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 TGFBRAP1Q8WUH2 860 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 ZSCAN16Q9H4T2 348 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-210ENST00000571613 LMBRD1Q9NUN5 540 aa22.74■■□□□ 1.23
RPAIN-210ENST00000571613 NID2Q14112 1375 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 ROBO3Q96MS0 1386 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 DLEC1Q9Y238 1755 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 HDLBPQ00341 1268 aaKnown RBP22.73■■□□□ 1.23
RPAIN-210ENST00000571613 GSE1Q14687 1217 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 KLHL40Q2TBA0 621 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 CCDC178Q5BJE1 867 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 DDX11Q96FC9 970 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 TTF2Q9UNY4 1162 aaKnown RBP22.73■■□□□ 1.23
RPAIN-210ENST00000571613 SNED1Q8TER0 1413 aa22.73■■□□□ 1.23
RPAIN-210ENST00000571613 BAZ2AQ9UIF9 1905 aaKnown RBP22.72■■□□□ 1.23
RPAIN-210ENST00000571613 ECE2O60344 883 aa22.72■■□□□ 1.23
RPAIN-210ENST00000571613 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
RPAIN-210ENST00000571613 ZSCAN10Q96SZ4 725 aaPredicted RBP22.72■■□□□ 1.23
RPAIN-210ENST00000571613 PSMD1Q99460 953 aa22.72■■□□□ 1.23
RPAIN-210ENST00000571613 ZNF219Q9P2Y4 722 aaPredicted RBP22.72■■□□□ 1.23
RPAIN-210ENST00000571613 DAGLAQ9Y4D2 1042 aa22.72■■□□□ 1.23
RPAIN-210ENST00000571613 CYP2D7A0A087X1C5 515 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 PRPF40AO75400 957 aaKnown RBP22.71■■□□□ 1.23
RPAIN-210ENST00000571613 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
RPAIN-210ENST00000571613 RHBDL3P58872 404 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 TEKT1Q969V4 418 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 DBNDD1Q9H9R9 158 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 DDX49Q9Y6V7 483 aaKnown RBP22.71■■□□□ 1.23
RPAIN-210ENST00000571613 LAMB1P07942 1786 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 USP17L3A6NCW0 530 aa22.71■■□□□ 1.23
RPAIN-210ENST00000571613 USP17L4A6NCW7 530 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms