RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 HSPA6P17066 643 aa12.37□□□□□ -0.43
LITAF-207ENST00000571459 SDSP20132 328 aa12.37□□□□□ -0.43
LITAF-207ENST00000571459 TTLL12Q14166 644 aaPredicted RBP12.37□□□□□ -0.43
LITAF-207ENST00000571459 ZMYM1Q5SVZ6 1142 aa12.37□□□□□ -0.43
LITAF-207ENST00000571459 C2orf69Q8N8R5 385 aa12.37□□□□□ -0.43
LITAF-207ENST00000571459 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
LITAF-207ENST00000571459 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 M0R2C6 588 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 PRKAB2O43741 272 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 HTRA3P83110 453 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 MOB2Q70IA6 237 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 TICAM2Q86XR7 235 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 GBA2Q9HCG7 927 aaPredicted RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 SAP30BPQ9UHR5 308 aaKnown RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 ABT1Q9ULW3 272 aaKnown RBP12.36□□□□□ -0.43
LITAF-207ENST00000571459 FZD1Q9UP38 647 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 FLT1P17948 1338 aa12.36□□□□□ -0.43
LITAF-207ENST00000571459 MYH1P12882 1939 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 UBE2Q2LH0YL09 131 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 GPAA1O43292 621 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
LITAF-207ENST00000571459 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
LITAF-207ENST00000571459 SDR42E1Q8WUS8 393 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 PALD1Q9ULE6 856 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
LITAF-207ENST00000571459 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 HIP1O00291 1037 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
LITAF-207ENST00000571459 HUNKP57058 714 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 CWC27Q6UX04 472 aaKnown RBP12.34□□□□□ -0.43
LITAF-207ENST00000571459 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
LITAF-207ENST00000571459 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 ANGEL1Q9UNK9 670 aaKnown RBP12.34□□□□□ -0.43
LITAF-207ENST00000571459 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
LITAF-207ENST00000571459 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
LITAF-207ENST00000571459 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
LITAF-207ENST00000571459 APPP05067 770 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 GNAT2P19087 354 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 FKBP1BP68106 108 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 SLC4A8Q2Y0W8 1093 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 DCP1AQ9NPI6 582 aaPredicted RBP12.33□□□□□ -0.44
LITAF-207ENST00000571459 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
LITAF-207ENST00000571459 PI4KBQ9UBF8 816 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
LITAF-207ENST00000571459 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
LITAF-207ENST00000571459 ATRNL1Q5VV63 1379 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
LITAF-207ENST00000571459 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
LITAF-207ENST00000571459 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
LITAF-207ENST00000571459 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 BMP2KLQ5H9B9 411 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 ZNF341Q9BYN7 854 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
LITAF-207ENST00000571459 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 CYP2D6P10635 497 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 CHMLP26374 656 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
LITAF-207ENST00000571459 FOXP4Q8IVH2 680 aaPredicted RBP12.31□□□□□ -0.44
LITAF-207ENST00000571459 CRACR2BQ8N4Y2 399 aaPredicted RBP12.31□□□□□ -0.44
LITAF-207ENST00000571459 KLRG1Q96E93 195 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.443e-7■■■□□ 18
LITAF-207ENST00000571459 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
LITAF-207ENST00000571459 COL2A1P02458 1487 aaPredicted RBP12.31□□□□□ -0.44
LITAF-207ENST00000571459 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 USP17L21D6R901 530 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 TBC1D12O60347 775 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 TDO2P48775 406 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 PLCD1P51178 756 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 ZNF157P51786 506 aaPredicted RBP12.3□□□□□ -0.44
LITAF-207ENST00000571459 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
LITAF-207ENST00000571459 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms