RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
PRPF8-202ENST00000571346 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
PRPF8-202ENST00000571346 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
PRPF8-202ENST00000571346 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
PRPF8-202ENST00000571346 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
PRPF8-202ENST00000571346 TNRC18O15417 2968 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 DOCK1Q14185 1865 aa16.74■□□□□ 0.27
PRPF8-202ENST00000571346 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 FBXO46Q6PJ61 603 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 FAM163AQ96GL9 167 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 ERO1AQ96HE7 468 aa16.74■□□□□ 0.27
PRPF8-202ENST00000571346 NOL10Q9BSC4 688 aaKnown RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
PRPF8-202ENST00000571346 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
PRPF8-202ENST00000571346 LDHCP07864 332 aa16.73■□□□□ 0.27
PRPF8-202ENST00000571346 PPATQ06203 517 aa16.73■□□□□ 0.27
PRPF8-202ENST00000571346 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
PRPF8-202ENST00000571346 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
PRPF8-202ENST00000571346 RCAN3Q9UKA8 241 aa16.73■□□□□ 0.27
PRPF8-202ENST00000571346 NOP58Q9Y2X3 529 aaKnown RBP16.73■□□□□ 0.27
PRPF8-202ENST00000571346 DDTLA6NHG4 134 aaPredicted RBP16.72■□□□□ 0.27
PRPF8-202ENST00000571346 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 RHBDL3P58872 404 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 SP3Q02447 781 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
PRPF8-202ENST00000571346 SH3BP5LQ7L8J4 393 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 OTOP1Q7RTM1 612 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
PRPF8-202ENST00000571346 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
PRPF8-202ENST00000571346 APBB1O00213 710 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 NOL9Q5SY16 702 aaKnown RBP16.71■□□□□ 0.27
PRPF8-202ENST00000571346 AACSQ86V21 672 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 AATFQ9NY61 560 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRPF8-202ENST00000571346 DDX19BQ9UMR2 479 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 BRCA2P51587 3418 aa16.71■□□□□ 0.27
PRPF8-202ENST00000571346 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
PRPF8-202ENST00000571346 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 ZAP70P43403 619 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 SCYL3Q8IZE3 742 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
PRPF8-202ENST00000571346 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
PRPF8-202ENST00000571346 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
PRPF8-202ENST00000571346 SH3RF3Q8TEJ3 882 aaPredicted RBP16.69■□□□□ 0.26
PRPF8-202ENST00000571346 OSBPL5Q9H0X9 879 aaPredicted RBP16.69■□□□□ 0.26
PRPF8-202ENST00000571346 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
PRPF8-202ENST00000571346 NDUFB9Q9Y6M9 179 aa16.69■□□□□ 0.26
PRPF8-202ENST00000571346 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
PRPF8-202ENST00000571346 FOCADQ5VW36 1801 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 HMMRO75330 724 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
PRPF8-202ENST00000571346 ECM2O94769 699 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-202ENST00000571346 BAG3O95817 575 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 RGS19P49795 217 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 HSP90AB4PQ58FF6 505 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 ZCCHC17Q9NP64 241 aaKnown RBP16.68■□□□□ 0.26
PRPF8-202ENST00000571346 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
PRPF8-202ENST00000571346 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-202ENST00000571346 KCNH4Q9UQ05 1017 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 ZHX2Q9Y6X8 837 aa16.68■□□□□ 0.26
PRPF8-202ENST00000571346 PDHXO00330 501 aa16.67■□□□□ 0.26
PRPF8-202ENST00000571346 TLR2O60603 784 aa16.67■□□□□ 0.26
PRPF8-202ENST00000571346 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
PRPF8-202ENST00000571346 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
PRPF8-202ENST00000571346 ADGRA1Q86SQ6 560 aa16.67■□□□□ 0.26
PRPF8-202ENST00000571346 ZNF512BQ96KM6 892 aaPredicted RBP16.67■□□□□ 0.26
PRPF8-202ENST00000571346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRPF8-202ENST00000571346 PTPRFP10586 1907 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
PRPF8-202ENST00000571346 PLCG2P16885 1265 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 PTPRAP18433 802 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 CAP1Q01518 475 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 CCDC84Q86UT8 332 aaPredicted RBP16.66■□□□□ 0.26
PRPF8-202ENST00000571346 MAPKAPK5Q8IW41 473 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 FLT1P17948 1338 aa16.66■□□□□ 0.26
PRPF8-202ENST00000571346 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
PRPF8-202ENST00000571346 KIF22Q14807 665 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
PRPF8-202ENST00000571346 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 TGFBRAP1Q8WUH2 860 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 PARK7Q99497 189 aaKnown RBP16.65■□□□□ 0.26
PRPF8-202ENST00000571346 ARHGAP39Q9C0H5 1083 aa16.65■□□□□ 0.26
PRPF8-202ENST00000571346 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms