RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 USP17L12C9JPN9 530 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 USP17L21D6R901 530 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
CDRT1-206ENST00000571263 GMPSP49915 693 aaPredicted RBP14.14□□□□□ -0.15
CDRT1-206ENST00000571263 PPARAQ07869 468 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 CTR9Q6PD62 1173 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 MFSD6Q6ZSS7 791 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 NCOA7Q8NI08 942 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 SNX21Q969T3 373 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 KIF2CQ99661 725 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 ALDH8A1Q9H2A2 487 aaPredicted RBP14.14□□□□□ -0.15
CDRT1-206ENST00000571263 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
CDRT1-206ENST00000571263 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
CDRT1-206ENST00000571263 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 E7EWF7 191 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
CDRT1-206ENST00000571263 HLA-DOAP06340 250 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 TNNI2P48788 182 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 PDE4BQ07343 736 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 TNFAIP1Q13829 316 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 ANKRD1Q15327 319 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 RALYLQ86SE5 291 aaKnown RBP14.13□□□□□ -0.15
CDRT1-206ENST00000571263 STAG1Q8WVM7 1258 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 ZBED3Q96IU2 234 aaPredicted RBP14.13□□□□□ -0.15
CDRT1-206ENST00000571263 PRMT6Q96LA8 375 aaPredicted RBP14.13□□□□□ -0.15
CDRT1-206ENST00000571263 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
CDRT1-206ENST00000571263 FLT1P17948 1338 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
CDRT1-206ENST00000571263 WDHD1O75717 1129 aaPredicted RBP14.12□□□□□ -0.15
CDRT1-206ENST00000571263 FGRP09769 529 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 NEK4P51957 841 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 SPDYE2Q495Y8 402 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 DHX32Q7L7V1 743 aaKnown RBP14.12□□□□□ -0.15
CDRT1-206ENST00000571263 FAM83AQ86UY5 434 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 MAPKAPK5Q8IW41 473 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 GPRC5DQ9NZD1 345 aa14.12□□□□□ -0.15
CDRT1-206ENST00000571263 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
CDRT1-206ENST00000571263 CASTP20810 708 aaKnown RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 MCM5P33992 734 aa14.11□□□□□ -0.15
CDRT1-206ENST00000571263 FOXP4Q8IVH2 680 aaPredicted RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 ESR2Q92731 530 aa14.11□□□□□ -0.15
CDRT1-206ENST00000571263 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
CDRT1-206ENST00000571263 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 TDRD3Q9H7E2 651 aaKnown RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 ZNF70Q9UC06 446 aaPredicted RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
CDRT1-206ENST00000571263 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 GLTPD2A6NH11 291 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 WNT10BO00744 389 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 ORC4O43929 436 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 RPS6KB1P23443 525 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 HAND2P61296 217 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 CCDC178Q5BJE1 867 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 FBXL16Q8N461 479 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 L3MBTL3Q96JM7 780 aaPredicted RBP14.1□□□□□ -0.15
CDRT1-206ENST00000571263 EHD4Q9H223 541 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 ADARB2Q9NS39 739 aaKnown RBP14.1□□□□□ -0.15
CDRT1-206ENST00000571263 PDRG1Q9NUG6 133 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 PI4KBQ9UBF8 816 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 SWAP70Q9UH65 585 aa14.1□□□□□ -0.15
CDRT1-206ENST00000571263 IQCA1LA6NCM1 817 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
CDRT1-206ENST00000571263 PICALMQ13492 652 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 KIF4BQ2VIQ3 1234 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 HSCBQ8IWL3 235 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 TMTC2Q8N394 836 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 HOOK2Q96ED9 719 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 TIAM2Q8IVF5 1701 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 ATRNL1Q5VV63 1379 aa14.09□□□□□ -0.15
CDRT1-206ENST00000571263 FGD1P98174 961 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 SART3Q15020 963 aaKnown RBP14.08□□□□□ -0.16
CDRT1-206ENST00000571263 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
CDRT1-206ENST00000571263 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
CDRT1-206ENST00000571263 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
CDRT1-206ENST00000571263 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 FAM198AQ9UFP1 575 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 SERPINB13Q9UIV8 391 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 LAMA4Q16363 1823 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 FOCADQ5VW36 1801 aa14.08□□□□□ -0.16
CDRT1-206ENST00000571263 ECM29Q5VYK3 1845 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 ERICH2A1L162 156 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 EXOSC10Q01780 885 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 NFIAQ12857 509 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 NBPF9Q3BBW0 867 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms