RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 GSTO1P78417 241 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 CCL15Q16663 113 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 NOM1Q5C9Z4 860 aaKnown RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 NOL9Q5SY16 702 aaKnown RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 ADGRA1Q86SQ6 560 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 AACSQ86V21 672 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 ERO1BQ86YB8 467 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 ERC1Q8IUD2 1116 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 ZSCAN29Q8IWY8 852 aaPredicted RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 RPAP2Q8IXW5 612 aaPredicted RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 RHPN1Q8TCX5 695 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 SH3RF3Q8TEJ3 882 aaPredicted RBP6.63□□□□□ -1.35
CHD3-212ENST00000570758 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 ANTXR1Q9H6X2 564 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 NDUFB9Q9Y6M9 179 aa6.63□□□□□ -1.35
CHD3-212ENST00000570758 FAM196BA6NMK8 535 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 PHF20L1A8MW92 1017 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 IRF6O14896 467 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 FKTNO75072 461 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 HMMRO75330 724 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 NPM3O75607 178 aaKnown RBP6.62□□□□□ -1.35
CHD3-212ENST00000570758 ALDH1A1P00352 501 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 GTF2A2P52657 109 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 CAP1Q01518 475 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 MAP3K10Q02779 954 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 CRHR2Q13324 411 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 PPIL2Q13356 520 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 HSP90AB4PQ58FF6 505 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 NAA16Q6N069 864 aaPredicted RBP6.62□□□□□ -1.35
CHD3-212ENST00000570758 CTU1Q7Z7A3 348 aaKnown RBP6.62□□□□□ -1.35
CHD3-212ENST00000570758 TEX11Q8IYF3 940 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 FAM43AQ8N2R8 423 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.62□□□□□ -1.35
CHD3-212ENST00000570758 MYO5AQ9Y4I1 1855 aaKnown RBP6.62□□□□□ -1.35
CHD3-212ENST00000570758 DOCK2Q92608 1830 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 MAST2Q6P0Q8 1798 aa6.62□□□□□ -1.35
CHD3-212ENST00000570758 AK9Q5TCS8 1911 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 BTBD19C9JJ37 291 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 RAB11FIP3O75154 756 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 MAP4K4O95819 1239 aaPredicted RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 CETPP11597 493 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 CYP7A1P22680 504 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 PPP4CP60510 307 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 DYNLL1P63167 89 aaKnown RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 PPATQ06203 517 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 SNAPC2Q13487 334 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 MOGSQ13724 837 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 RRP1BQ14684 758 aaKnown RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 OTUD7BQ6GQQ9 843 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 CCDC84Q86UT8 332 aaPredicted RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 SCYL3Q8IZE3 742 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 CD99L2Q8TCZ2 262 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 KIF1BPQ96EK5 621 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 OSBPL5Q9H0X9 879 aaPredicted RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
CHD3-212ENST00000570758 AATFQ9NY61 560 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD3-212ENST00000570758 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.61□□□□□ -1.35
CHD3-212ENST00000570758 COL2A1P02458 1487 aaPredicted RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 FLT1P17948 1338 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 TBC1D12O60347 775 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 IDH1O75874 414 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 BAG3O95817 575 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 IFIT2P09913 472 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 PTPRAP18433 802 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 TAF1CQ15572 869 aaPredicted RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 OTOP1Q7RTM1 612 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 MAPKAPK5Q8IW41 473 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 CLASRPQ8N2M8 674 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 MAGEB6Q8N7X4 407 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 TGFBRAP1Q8WUH2 860 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 EDC3Q96F86 508 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 YTHDC1Q96MU7 727 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 NOL10Q9BSC4 688 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 CHMP4BQ9H444 224 aaKnown RBP6.6□□□□□ -1.35
CHD3-212ENST00000570758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.6□□□□□ -1.35
CHD3-212ENST00000570758 ZFYVE28Q9HCC9 887 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 HPS5Q9UPZ3 1129 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 KCNH4Q9UQ05 1017 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 SIPA1L1O43166 1804 aa6.6□□□□□ -1.35
CHD3-212ENST00000570758 GOLIM4O00461 696 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 CXCL11O14625 94 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 CTNND1O60716 968 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 PLCG2P16885 1265 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 RRP1P56182 461 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 JAG1P78504 1218 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 SP3Q02447 781 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 PKN2Q16513 984 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 SHROOM1Q2M3G4 852 aaPredicted RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 GPAT2Q6NUI2 795 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 FBXO46Q6PJ61 603 aaPredicted RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 ANKRD23Q86SG2 305 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 MIGA1Q8NAN2 632 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 ERO1AQ96HE7 468 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 DNAJC2Q99543 621 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 BOLA2Q9H3K6 86 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms