RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 FAN1Q9Y2M0 1017 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
SMG6-207ENST00000570756 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
SMG6-207ENST00000570756 SPEF2Q9C093 1822 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 MYL6BP14649 208 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 LONRF3Q496Y0 759 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 TTLL5Q6EMB2 1281 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 COPS6Q7L5N1 327 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
SMG6-207ENST00000570756 PPM1EQ8WY54 764 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 GPR108Q9NPR9 543 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 LZTFL1Q9NQ48 299 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 MAP3K15Q6ZN16 1313 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
SMG6-207ENST00000570756 PDE4BQ07343 736 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 NCOA7Q8NI08 942 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 ABCB6Q9NP58 842 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 NFAT5O94916 1531 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 CTAGE9A4FU28 777 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
SMG6-207ENST00000570756 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
SMG6-207ENST00000570756 PNKPQ96T60 521 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 ALG1Q9BT22 464 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 ADGRG1Q9Y653 693 aa17.59■□□□□ 0.41
SMG6-207ENST00000570756 PIP4K2BP78356 416 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 KIF4BQ2VIQ3 1234 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 HSP90AA4PQ58FG1 418 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 BRINP3Q76B58 766 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 CCDC102AQ96A19 550 aa17.58■□□□□ 0.41
SMG6-207ENST00000570756 EIF3CLB5ME19 914 aaKnown RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 M0R2C6 588 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 IFIT1P09914 478 aaKnown RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 BMP6P22004 513 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 CDC27P30260 824 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 CASP8Q14790 479 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 CPLX2Q6PUV4 134 aaKnown RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 TRIML1Q8N9V2 468 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 MAP3K14Q99558 947 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 EIF3CQ99613 913 aaKnown RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 IRX2Q9BZI1 471 aaPredicted RBP17.58■□□□□ 0.4
SMG6-207ENST00000570756 DCCP43146 1447 aa17.58■□□□□ 0.4
SMG6-207ENST00000570756 AFDNP55196 1824 aaKnown RBP17.57■□□□□ 0.4
SMG6-207ENST00000570756 SOWAHDA6NJG2 315 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 NR1I3Q14994 352 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 MAN1B1Q9UKM7 699 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 CTAGE15A4D2H0 777 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 CTAGE8P0CG41 777 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 MTF1Q14872 753 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 POSTNQ15063 836 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 WHAMMP3Q1A5X7 153 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 TAF7LQ5H9L4 462 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 ZNF569Q5MCW4 686 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 KRT40Q6A162 431 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 CTAGE6Q86UF2 777 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 CTAGE4Q8IX94 777 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 KRI1Q8N9T8 703 aaKnown RBP17.57■□□□□ 0.4
SMG6-207ENST00000570756 ZFP91Q96JP5 570 aaPredicted RBP17.57■□□□□ 0.4
SMG6-207ENST00000570756 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
SMG6-207ENST00000570756 C4AP0C0L4 1744 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 ZMYM6O95789 1325 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 A0A1B0GTH6 734 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 N4BP1O75113 896 aaKnown RBP17.56■□□□□ 0.4
SMG6-207ENST00000570756 CORO7P57737 925 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 HAND2P61296 217 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 MDM2Q00987 491 aaPredicted RBP17.56■□□□□ 0.4
SMG6-207ENST00000570756 TRIM29Q14134 588 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 NT5DC1Q5TFE4 455 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMG6-207ENST00000570756 GEMIN8Q9NWZ8 242 aaKnown RBP17.56■□□□□ 0.4
SMG6-207ENST00000570756 JRKLQ9Y4A0 524 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
SMG6-207ENST00000570756 A0A087WZG4 1122 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 FMR1Q06787 632 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMG6-207ENST00000570756 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 TTF2Q9UNY4 1162 aaKnown RBP17.56■□□□□ 0.4
SMG6-207ENST00000570756 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
SMG6-207ENST00000570756 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
SMG6-207ENST00000570756 CPDO75976 1380 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 ZFYP08048 801 aaPredicted RBP17.55■□□□□ 0.4
SMG6-207ENST00000570756 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 RASGRP2Q7LDG7 609 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 CERS3Q8IU89 383 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 RHOXF2BP0C7M4 288 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
SMG6-207ENST00000570756 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
SMG6-207ENST00000570756 VSNL1P62760 191 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
SMG6-207ENST00000570756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMG6-207ENST00000570756 OSBP2Q969R2 916 aa17.55■□□□□ 0.4
SMG6-207ENST00000570756 RHOXF2Q9BQY4 288 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms