RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 GTF2A2P52657 109 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 RHBDL3P58872 404 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
RAB40B-203ENST00000570676 CCL15Q16663 113 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 TBC1D9Q6ZT07 1266 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 SH3BP5LQ7L8J4 393 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 SLF2Q8IX21 1173 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 NSUN4Q96CB9 384 aaKnown RBP18.55■□□□□ 0.56
RAB40B-203ENST00000570676 DDX4Q9NQI0 724 aaKnown RBP18.55■□□□□ 0.56
RAB40B-203ENST00000570676 COL2A1P02458 1487 aaPredicted RBP18.54■□□□□ 0.56
RAB40B-203ENST00000570676 GPR75-ASB3A0A0A6YYF3 556 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 RGS19P49795 217 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 PPIL2Q13356 520 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 AAMPQ13685 434 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 OTUD7BQ6GQQ9 843 aa18.54■□□□□ 0.56
RAB40B-203ENST00000570676 IRF6O14896 467 aa18.53■□□□□ 0.56
RAB40B-203ENST00000570676 PKN2Q16513 984 aaKnown RBP18.53■□□□□ 0.56
RAB40B-203ENST00000570676 NOL9Q5SY16 702 aaKnown RBP18.53■□□□□ 0.56
RAB40B-203ENST00000570676 FAM43AQ8N2R8 423 aa18.53■□□□□ 0.56
RAB40B-203ENST00000570676 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
RAB40B-203ENST00000570676 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
RAB40B-203ENST00000570676 HPS5Q9UPZ3 1129 aa18.53■□□□□ 0.56
RAB40B-203ENST00000570676 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
RAB40B-203ENST00000570676 DDTLA6NHG4 134 aaPredicted RBP18.52■□□□□ 0.56
RAB40B-203ENST00000570676 TTC39AQ5SRH9 613 aa18.52■□□□□ 0.56
RAB40B-203ENST00000570676 RBBP6Q7Z6E9 1792 aaKnown RBP18.51■□□□□ 0.55
RAB40B-203ENST00000570676 CAP1Q01518 475 aa18.51■□□□□ 0.55
RAB40B-203ENST00000570676 PPATQ06203 517 aa18.51■□□□□ 0.55
RAB40B-203ENST00000570676 PICALMQ13492 652 aa18.51■□□□□ 0.55
RAB40B-203ENST00000570676 FBXO46Q6PJ61 603 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-203ENST00000570676 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-203ENST00000570676 SNRKQ9NRH2 765 aa18.51■□□□□ 0.55
RAB40B-203ENST00000570676 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
RAB40B-203ENST00000570676 PHF20L1A8MW92 1017 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
RAB40B-203ENST00000570676 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 CETPP11597 493 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 GSTO1P78417 241 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 MAP3K10Q02779 954 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 SNAPC2Q13487 334 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 TAF1CQ15572 869 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-203ENST00000570676 CCDC158Q5M9N0 1113 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 EAF2Q96CJ1 260 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-203ENST00000570676 KCNH4Q9UQ05 1017 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
RAB40B-203ENST00000570676 BTBD19C9JJ37 291 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-203ENST00000570676 LDHCP07864 332 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 SOX10P56693 466 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 CD99L2Q8TCZ2 262 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
RAB40B-203ENST00000570676 ZCCHC17Q9NP64 241 aaKnown RBP18.49■□□□□ 0.55
RAB40B-203ENST00000570676 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
RAB40B-203ENST00000570676 MAP4K4O95819 1239 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-203ENST00000570676 ADGRA1Q86SQ6 560 aa18.48■□□□□ 0.55
RAB40B-203ENST00000570676 ZSCAN29Q8IWY8 852 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-203ENST00000570676 CCDC8Q9H0W5 538 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-203ENST00000570676 ZFYVE28Q9HCC9 887 aa18.48■□□□□ 0.55
RAB40B-203ENST00000570676 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
RAB40B-203ENST00000570676 TRIM17Q9Y577 477 aa18.48■□□□□ 0.55
RAB40B-203ENST00000570676 DDX60LQ5H9U9 1706 aaKnown RBP18.48■□□□□ 0.55
RAB40B-203ENST00000570676 ZAP70P43403 619 aa18.47■□□□□ 0.55
RAB40B-203ENST00000570676 SP3Q02447 781 aa18.47■□□□□ 0.55
RAB40B-203ENST00000570676 MOGSQ13724 837 aa18.47■□□□□ 0.55
RAB40B-203ENST00000570676 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
RAB40B-203ENST00000570676 PIH1D3Q9NQM4 214 aaKnown RBP18.47■□□□□ 0.55
RAB40B-203ENST00000570676 PCDHB15Q9Y5E8 787 aa18.47■□□□□ 0.55
RAB40B-203ENST00000570676 MLLT1Q03111 559 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-203ENST00000570676 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
RAB40B-203ENST00000570676 OSBPL5Q9H0X9 879 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-203ENST00000570676 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
RAB40B-203ENST00000570676 MYH1P12882 1939 aa18.46■□□□□ 0.55
RAB40B-203ENST00000570676 ADGRA2Q96PE1 1338 aa18.46■□□□□ 0.55
RAB40B-203ENST00000570676 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-203ENST00000570676 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
RAB40B-203ENST00000570676 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
RAB40B-203ENST00000570676 TEX11Q8IYF3 940 aa18.45■□□□□ 0.54
RAB40B-203ENST00000570676 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-203ENST00000570676 MGAMO43451 1857 aa18.45■□□□□ 0.54
RAB40B-203ENST00000570676 NAV1Q8NEY1 1877 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 FAM196BA6NMK8 535 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 TBC1D12O60347 775 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 TLR2O60603 784 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 PTPRAP18433 802 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 AACSQ86V21 672 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-203ENST00000570676 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
RAB40B-203ENST00000570676 AATFQ9NY61 560 aaKnown RBP eCLIP18.44■□□□□ 0.544e-8■■■■■ 70.4
RAB40B-203ENST00000570676 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-203ENST00000570676 IGSF3O75054 1194 aa18.43■□□□□ 0.54
RAB40B-203ENST00000570676 EFCC1Q9HA90 598 aa18.43■□□□□ 0.54
RAB40B-203ENST00000570676 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
RAB40B-203ENST00000570676 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
RAB40B-203ENST00000570676 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
RAB40B-203ENST00000570676 CXCL11O14625 94 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms