RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
TCF4-246ENST00000570287 APPP05067 770 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 LINS1Q8NG48 757 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 YY1AP1Q9H869 796 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 OGFRQ9NZT2 677 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 TCEAL9Q9UHQ7 104 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 ZDHHC9Q9Y397 364 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 UTYO14607 1347 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 PHKG2P15735 406 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 MZF1P28698 734 aaPredicted RBP9.4□□□□□ -0.9
TCF4-246ENST00000570287 CDKN1CP49918 316 aaPredicted RBP9.4□□□□□ -0.9
TCF4-246ENST00000570287 ZNF790Q6PG37 636 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 NUDT18Q6ZVK8 323 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 ERC1Q8IUD2 1116 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 TSEN2Q8NCE0 465 aaKnown RBP9.4□□□□□ -0.9
TCF4-246ENST00000570287 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
TCF4-246ENST00000570287 STRCP1A6NGW2 1772 aa9.4□□□□□ -0.9
TCF4-246ENST00000570287 SYCE3A1L190 88 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 PRAMEF22A3QJZ6 481 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 MBD3O95983 291 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 NEK4P51957 841 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 PRSS12P56730 875 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 UVSSAQ2YD98 709 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 CNTROBQ8N137 903 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 TNS3Q68CZ2 1445 aa9.4□□□□□ -0.91
TCF4-246ENST00000570287 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
TCF4-246ENST00000570287 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
TCF4-246ENST00000570287 IFNL2Q8IZJ0 200 aa9.39□□□□□ -0.91
TCF4-246ENST00000570287 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
TCF4-246ENST00000570287 C12orf49Q9H741 205 aa9.39□□□□□ -0.91
TCF4-246ENST00000570287 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
TCF4-246ENST00000570287 PKP1Q13835 747 aa9.39□□□□□ -0.91
TCF4-246ENST00000570287 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
TCF4-246ENST00000570287 SFMBT1Q9UHJ3 866 aa9.39□□□□□ -0.91
TCF4-246ENST00000570287 MRC1P22897 1456 aa9.39□□□□□ -0.91
TCF4-246ENST00000570287 GRM8O00222 908 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 TULP2O00295 520 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 CLASRPQ8N2M8 674 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 SLC39A13Q96H72 371 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 MEGF6O75095 1541 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 C5P01031 1676 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 FAM184AQ8NB25 1140 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 SGSM2O43147 1006 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 HSPA4P34932 840 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 GNALP38405 381 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 CUL4AQ13619 759 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 CWF19L2Q2TBE0 894 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 TKFCQ3LXA3 575 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 SH3TC2Q8TF17 1288 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 NSFL1CQ9UNZ2 370 aaKnown RBP9.38□□□□□ -0.91
TCF4-246ENST00000570287 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
TCF4-246ENST00000570287 U2AF2P26368 475 aaKnown RBP eCLIP9.37□□□□□ -0.91
TCF4-246ENST00000570287 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 INTS4Q96HW7 963 aaKnown RBP9.37□□□□□ -0.91
TCF4-246ENST00000570287 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 ZNF512BQ96KM6 892 aaPredicted RBP9.37□□□□□ -0.91
TCF4-246ENST00000570287 SAP130Q9H0E3 1048 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
TCF4-246ENST00000570287 SNTG2Q9NY99 539 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 CPDO75976 1380 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 PAK2Q13177 524 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 PHTF2Q8N3S3 785 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
TCF4-246ENST00000570287 SUCLG2Q96I99 432 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 TSPY26PQ9H489 355 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 ECHDC1Q9NTX5 307 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 RAD50Q92878 1312 aa9.37□□□□□ -0.91
TCF4-246ENST00000570287 ESYT3A0FGR9 886 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 NEXNQ0ZGT2 675 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 DHX8Q14562 1220 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 CCDC102BQ68D86 513 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 DIAPH3Q9NSV4 1193 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 MAP3K20Q9NYL2 800 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 AIMP1Q12904 312 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 DNTTIP2Q5QJE6 756 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 C10orf62Q5T681 223 aaPredicted RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 KAZALD1Q96I82 304 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 IL25Q9H293 177 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 MORC2Q9Y6X9 1032 aaPredicted RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 IGKV5-2P06315 115 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 SLC10A3P09131 477 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms