RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 USP17L12C9JPN9 530 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 USP17L21D6R901 530 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 SPDYE6P0CI01 402 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 SAMD7Q7Z3H4 446 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 UPF3BQ9BZI7 483 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 NACAP1Q9BZK3 213 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 CTNNA3Q9UI47 895 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 CNOT7Q9UIV1 285 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 DDX60LQ5H9U9 1706 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 FLT1P17948 1338 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 TOMM70O94826 608 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 PLCG2P16885 1265 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 RPS12P25398 132 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
SPSB3-211ENST00000569380 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 JAKMIP1Q96N16 626 aaKnown RBP24.29■■□□□ 1.48
SPSB3-211ENST00000569380 ZNF213O14771 459 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 NBPF9Q3BBW0 867 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 RNF20Q5VTR2 975 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 ZFPM1Q8IX07 1006 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 GPC2Q8N158 579 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 MYOZ2Q9NPC6 264 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 ATP8A2Q9NTI2 1148 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 MCM9Q9NXL9 1143 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 MYH1P12882 1939 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 RPAP1Q9BWH6 1393 aaPredicted RBP24.28■■□□□ 1.48
SPSB3-211ENST00000569380 LAMB1P07942 1786 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 ZMYM6O95789 1325 aa24.28■■□□□ 1.48
SPSB3-211ENST00000569380 CEP350Q5VT06 3117 aa24.27■■□□□ 1.48
SPSB3-211ENST00000569380 ZNF280AP59817 542 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-211ENST00000569380 ANAPC15P60006 121 aa24.27■■□□□ 1.48
SPSB3-211ENST00000569380 TBC1D10BQ4KMP7 808 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-211ENST00000569380 SCAF8Q9UPN6 1271 aaKnown RBP24.27■■□□□ 1.48
SPSB3-211ENST00000569380 ASTN2O75129 1339 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-211ENST00000569380 E7EWF7 191 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 CD2BP2O95400 341 aaKnown RBP24.26■■□□□ 1.47
SPSB3-211ENST00000569380 ZKSCAN1P17029 563 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-211ENST00000569380 DPF2Q92785 391 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 IL17RAQ96F46 866 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 ZBED3Q96IU2 234 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-211ENST00000569380 POTECB2RU33 542 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 EPS15P42566 896 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 PPARAQ07869 468 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 TCP10Q12799 353 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 TCEANC2Q96MN5 208 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 FAM198AQ9UFP1 575 aa24.26■■□□□ 1.47
SPSB3-211ENST00000569380 WNT10BO00744 389 aa24.25■■□□□ 1.47
SPSB3-211ENST00000569380 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
SPSB3-211ENST00000569380 TSGA10IPQ3SY00 556 aa24.25■■□□□ 1.47
SPSB3-211ENST00000569380 DPY19L2Q6NUT2 758 aa24.25■■□□□ 1.47
SPSB3-211ENST00000569380 GIMAP6Q6P9H5 292 aa24.25■■□□□ 1.47
SPSB3-211ENST00000569380 GPRC5DQ9NZD1 345 aa24.25■■□□□ 1.47
SPSB3-211ENST00000569380 SLURP2P0DP57 97 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 PLCD1P51178 756 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 TRPM4Q8TD43 1214 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 ZNF70Q9UC06 446 aaPredicted RBP24.24■■□□□ 1.47
SPSB3-211ENST00000569380 NEDD4P46934 1319 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 WDR90Q96KV7 1748 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 CERS3Q8IU89 383 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 MTMR14Q8NCE2 650 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 DYNLL2Q96FJ2 89 aa24.24■■□□□ 1.47
SPSB3-211ENST00000569380 TCP10L2B9ZVM9 353 aa24.23■■□□□ 1.47
SPSB3-211ENST00000569380 VEGFAP15692 232 aaPredicted RBP24.23■■□□□ 1.47
SPSB3-211ENST00000569380 NEK4P51957 841 aa24.22■■□□□ 1.47
SPSB3-211ENST00000569380 RABEP1Q15276 862 aa24.22■■□□□ 1.47
SPSB3-211ENST00000569380 DDRGK1Q96HY6 314 aa24.22■■□□□ 1.47
SPSB3-211ENST00000569380 OSBPL5Q9H0X9 879 aaPredicted RBP24.22■■□□□ 1.47
SPSB3-211ENST00000569380 HSPA6P17066 643 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 KIF4BQ2VIQ3 1234 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 SPDYE2Q495Y8 402 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 SBK1Q52WX2 424 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 C12orf60Q5U649 245 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 CHST3Q7LGC8 479 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 RBM46Q8TBY0 533 aaKnown RBP24.21■■□□□ 1.47
SPSB3-211ENST00000569380 NEK1Q96PY6 1258 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 VEZTQ9HBM0 779 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 ARPP21Q9UBL0 812 aaPredicted RBP24.21■■□□□ 1.47
SPSB3-211ENST00000569380 POLR3DP05423 398 aaPredicted RBP24.21■■□□□ 1.47
SPSB3-211ENST00000569380 SH3BP5LQ7L8J4 393 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 SLC44A5Q8NCS7 719 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 LARP6Q9BRS8 491 aaKnown RBP24.21■■□□□ 1.47
SPSB3-211ENST00000569380 IDI2Q9BXS1 227 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 ZSWIM6Q9HCJ5 1215 aa24.21■■□□□ 1.47
SPSB3-211ENST00000569380 PRDM1O75626 825 aa24.2■■□□□ 1.46
SPSB3-211ENST00000569380 ANP32AP39687 249 aaKnown RBP24.2■■□□□ 1.46
SPSB3-211ENST00000569380 LRRC2Q9BYS8 371 aa24.2■■□□□ 1.46
SPSB3-211ENST00000569380 ANAPC4Q9UJX5 808 aa24.2■■□□□ 1.46
SPSB3-211ENST00000569380 SIPA1L1O43166 1804 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 DDTLA6NHG4 134 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-211ENST00000569380 H7C1D1 291 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 HIRAP54198 1017 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-211ENST00000569380 RRP12Q5JTH9 1297 aaKnown RBP24.19■■□□□ 1.46
SPSB3-211ENST00000569380 AKNAD1Q5T1N1 836 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 NOL8Q76FK4 1167 aaKnown RBP24.19■■□□□ 1.46
SPSB3-211ENST00000569380 B4E1Z4 1266 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 CDAN1Q8IWY9 1227 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 STAG1Q8WVM7 1258 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 TM6SF1Q9BZW5 370 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 CNTNAP1P78357 1384 aa24.19■■□□□ 1.46
SPSB3-211ENST00000569380 KRT32Q14532 448 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms