RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RPAP1Q9BWH6 1393 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-225ENST00000569245 WDHD1O75717 1129 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-225ENST00000569245 BAG3O95817 575 aa17.63■□□□□ 0.41
COMMD4-225ENST00000569245 GJA5P36382 358 aa17.63■□□□□ 0.41
COMMD4-225ENST00000569245 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
COMMD4-225ENST00000569245 OTUD5Q96G74 571 aa17.63■□□□□ 0.41
COMMD4-225ENST00000569245 PIH1D3Q9NQM4 214 aaKnown RBP17.63■□□□□ 0.41
COMMD4-225ENST00000569245 IDH1O75874 414 aaKnown RBP17.62■□□□□ 0.41
COMMD4-225ENST00000569245 ALDH1A1P00352 501 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 IGHDP01880 384 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 RHBDL3P58872 404 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 CENPQQ7L2Z9 268 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-225ENST00000569245 IFNL1Q8IU54 200 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 TEX11Q8IYF3 940 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 NDUFB9Q9Y6M9 179 aa17.62■□□□□ 0.41
COMMD4-225ENST00000569245 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-225ENST00000569245 DDX4Q9NQI0 724 aaKnown RBP17.61■□□□□ 0.41
COMMD4-225ENST00000569245 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
COMMD4-225ENST00000569245 PLCG2P16885 1265 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 CYP7A1P22680 504 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 INPP5BP32019 993 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 GTF2A2P52657 109 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 ERO1BQ86YB8 467 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 SH3RF3Q8TEJ3 882 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-225ENST00000569245 LRRCC1Q9C099 1032 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 SNCAIPQ9Y6H5 919 aa17.6■□□□□ 0.41
COMMD4-225ENST00000569245 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-225ENST00000569245 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 IGSF3O75054 1194 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 DGKZQ13574 1117 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 SH3BP5LQ7L8J4 393 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 MAGEB6Q8N7X4 407 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
COMMD4-225ENST00000569245 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
COMMD4-225ENST00000569245 CCL15-CCL14A0A0B4J2E2 113 aa17.58■□□□□ 0.4
COMMD4-225ENST00000569245 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
COMMD4-225ENST00000569245 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
COMMD4-225ENST00000569245 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-225ENST00000569245 CCL15Q16663 113 aa17.58■□□□□ 0.4
COMMD4-225ENST00000569245 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.4
COMMD4-225ENST00000569245 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
COMMD4-225ENST00000569245 RFX7Q2KHR2 1363 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 GPR25O00155 361 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-225ENST00000569245 PPP4CP60510 307 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 SNAPC2Q13487 334 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 MS4A4AQ96JQ5 239 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 PTPN18Q99952 460 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-225ENST00000569245 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 PICK1Q9NRD5 415 aa17.57■□□□□ 0.4
COMMD4-225ENST00000569245 TESPA1A2RU30 521 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-225ENST00000569245 GOLIM4O00461 696 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 IRF6O14896 467 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 CETPP11597 493 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 PPATQ06203 517 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 PPIL2Q13356 520 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 MIGA1Q8NAN2 632 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 ZNF296Q8WUU4 475 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-225ENST00000569245 BRI3BPQ8WY22 251 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 MCOLN1Q9GZU1 580 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 R3HDMLQ9H3Y0 253 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 AKAP11Q9UKA4 1901 aa17.56■□□□□ 0.4
COMMD4-225ENST00000569245 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
COMMD4-225ENST00000569245 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
COMMD4-225ENST00000569245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
COMMD4-225ENST00000569245 CFHR5Q9BXR6 569 aa17.55■□□□□ 0.4
COMMD4-225ENST00000569245 BOLA2Q9H3K6 86 aa17.55■□□□□ 0.4
COMMD4-225ENST00000569245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
COMMD4-225ENST00000569245 FKTNO75072 461 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 ATP5JP18859 108 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 CRHR2Q13324 411 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
COMMD4-225ENST00000569245 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 SCYL3Q8IZE3 742 aa17.54■□□□□ 0.4
COMMD4-225ENST00000569245 DHX36Q9H2U1 1008 aaKnown RBP17.54■□□□□ 0.4
COMMD4-225ENST00000569245 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 TBC1D12O60347 775 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 USP5P45974 858 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 MAP3K10Q02779 954 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 NOM1Q5C9Z4 860 aaKnown RBP17.53■□□□□ 0.4
COMMD4-225ENST00000569245 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-225ENST00000569245 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
COMMD4-225ENST00000569245 CERS3Q8IU89 383 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 PAG1Q9NWQ8 432 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms