RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CORO1B	Q9BR76	489 aa		7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	ZFYVE1	Q9HBF4	777 aa		7.07	□□□□□ -1.28
UBR1-209	ENST00000569243	PARD6A	Q9NPB6	346 aa		7.06	□□□□□ -1.28
UBR1-209	ENST00000569243	LATS2	Q9NRM7	1088 aa		7.06	□□□□□ -1.28
UBR1-209	ENST00000569243	MPST	P25325	297 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	PDE3A	Q14432	1141 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	CYFIP1	Q7L576	1253 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	ASB11	Q8WXH4	323 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	WDR18	Q9BV38	432 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	DUSP23	Q9BVJ7	150 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	TNKS2	Q9H2K2	1166 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	PIDD1	Q9HB75	910 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	SMG5	Q9UPR3	1016 aa	Known RBP	7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	SNX11	Q9Y5W9	270 aa		7.05	□□□□□ -1.28
UBR1-209	ENST00000569243	GGN	Q86UU5	652 aa		7.04	□□□□□ -1.28
UBR1-209	ENST00000569243	TRIM56	Q9BRZ2	755 aa	Known RBP	7.04	□□□□□ -1.28
UBR1-209	ENST00000569243	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.04	□□□□□ -1.28
UBR1-209	ENST00000569243		A0A0G2JLL6	359 aa	Predicted RBP	7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	PHLDB3	Q6NSJ2	640 aa		7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	SNX29	Q8TEQ0	813 aa		7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	IRF2BPL	Q9H1B7	796 aa		7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	ZCCHC4	Q9H5U6	513 aa		7.03	□□□□□ -1.28
UBR1-209	ENST00000569243	ETV2	O00321	342 aa	Predicted RBP	7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	PHACTR2	O75167	634 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	TNFRSF21	O75509	655 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	MED14OS	P0DP75	135 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	LINC00310	P59036	64 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	KRTAP10-2	P60368	255 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	B4GALNT3	Q6L9W6	998 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	EGFL7	Q9UHF1	273 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	POLI	Q9UNA4	740 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243	UST	Q9Y2C2	406 aa		7.02	□□□□□ -1.29
UBR1-209	ENST00000569243		A0A096LPE4	126 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243		A0A1W2PPZ6	126 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	TMPRSS2	O15393	492 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	SYN1	P17600	705 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	BMP7	P18075	431 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	GJD3	Q8N144	294 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	EPB41L4B	Q9H329	900 aa		7.01	□□□□□ -1.29
UBR1-209	ENST00000569243	FZD6	O60353	706 aa		7	□□□□□ -1.29
UBR1-209	ENST00000569243	PSPN	O60542	156 aa		7	□□□□□ -1.29
UBR1-209	ENST00000569243	RNGTT	O60942	597 aa	Known RBP	7	□□□□□ -1.29
UBR1-209	ENST00000569243	AAMP	Q13685	434 aa		7	□□□□□ -1.29
UBR1-209	ENST00000569243	FANCD2OS	Q96PS1	177 aa		7	□□□□□ -1.29
UBR1-209	ENST00000569243	C1orf115	Q9H7X2	142 aa		7	□□□□□ -1.29
UBR1-209	ENST00000569243	LIG1	P18858	919 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	GLDC	P23378	1020 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	SPRED3	Q2MJR0	410 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	TOP6BL	Q8N6T0	577 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	HEXIM2	Q96MH2	286 aa	Known RBP	6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	ATXN3L	Q9H3M9	355 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	TMPRSS5	Q9H3S3	457 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	AMOTL2	Q9Y2J4	779 aa		6.99	□□□□□ -1.29
UBR1-209	ENST00000569243	MTMR3	Q13615	1198 aa		6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	DDX54	Q8TDD1	881 aa	Known RBP	6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	KCNN1	Q92952	543 aa		6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	WDR89	Q96FK6	387 aa	Predicted RBP	6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	C19orf73	Q9NVV2	129 aa		6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	SYNGAP1	Q96PV0	1343 aa		6.98	□□□□□ -1.29
UBR1-209	ENST00000569243	NEFL	P07196	543 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	HCLS1	P14317	486 aa	Predicted RBP	6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	GRIA4	P48058	902 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	TTLL4	Q14679	1199 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	NFIX	Q14938	502 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	SPACA3	Q8IXA5	215 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	ZFYVE28	Q9HCC9	887 aa		6.97	□□□□□ -1.29
UBR1-209	ENST00000569243	ICMT	O60725	284 aa		6.96	□□□□□ -1.3
UBR1-209	ENST00000569243	ID3	Q02535	119 aa		6.96	□□□□□ -1.3
UBR1-209	ENST00000569243	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.96	□□□□□ -1.3
UBR1-209	ENST00000569243	CARS2	Q9HA77	564 aa	Known RBP	6.96	□□□□□ -1.3
UBR1-209	ENST00000569243	DISC1	Q9NRI5	854 aa		6.96	□□□□□ -1.3
UBR1-209	ENST00000569243	GDNF	P39905	211 aa		6.95	□□□□□ -1.3
UBR1-209	ENST00000569243	CITED4	Q96RK1	184 aa		6.95	□□□□□ -1.3
UBR1-209	ENST00000569243	PCOLCE2	Q9UKZ9	415 aa		6.95	□□□□□ -1.3
UBR1-209	ENST00000569243	B3GALT4	O96024	378 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	ABL1	P00519	1130 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	NFKB2	Q00653	900 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	PDE4C	Q08493	712 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	NKPD1	Q17RQ9	610 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	ERICH6	Q7L0X2	663 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	CCNJL	Q8IV13	435 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	GALNT12	Q8IXK2	581 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	CCDC87	Q9NVE4	849 aa		6.94	□□□□□ -1.3
UBR1-209	ENST00000569243	POLR3D	P05423	398 aa	Predicted RBP	6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	SLFN14	P0C7P3	912 aa		6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	FAM214B	Q7L5A3	538 aa		6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	CCDC86	Q9H6F5	360 aa	Known RBP	6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	CNTNAP4	Q9C0A0	1308 aa		6.93	□□□□□ -1.3
UBR1-209	ENST00000569243	PDE3B	Q13370	1112 aa		6.92	□□□□□ -1.3
UBR1-209	ENST00000569243	C14orf37	Q86TY3	774 aa		6.92	□□□□□ -1.3
UBR1-209	ENST00000569243	KCNC2	Q96PR1	638 aa		6.92	□□□□□ -1.3
UBR1-209	ENST00000569243	SLC26A8	Q96RN1	970 aa		6.92	□□□□□ -1.3
UBR1-209	ENST00000569243	TCF12	Q99081	682 aa		6.92	□□□□□ -1.3

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