RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TCIRG1Q13488 830 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 PKDCCQ504Y2 493 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 TBC1D16Q8TBP0 767 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 ERO1AQ96HE7 468 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 OCSTAMPQ9BR26 566 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
CDH13-212ENST00000569144 PRM3Q9NNZ6 103 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 MYOZ2Q9NPC6 264 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
CDH13-212ENST00000569144 NUDCQ9Y266 331 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 GPSM3Q9Y4H4 160 aa7.75□□□□□ -1.17
CDH13-212ENST00000569144 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 MANSC4A6NHS7 340 aaPredicted RBP7.74□□□□□ -1.17
CDH13-212ENST00000569144 H0YGN5 161 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 GPR37L1O60883 481 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 SMPD1P17405 629 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 INHBEP58166 350 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 ARID5BQ14865 1188 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 Q6ZNB5 142 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 CELF1Q92879 486 aaKnown RBP7.74□□□□□ -1.17
CDH13-212ENST00000569144 CFAP53Q96M91 514 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 GMLQ99445 158 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 SZT2Q5T011 3432 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 BRCA2P51587 3418 aa7.74□□□□□ -1.17
CDH13-212ENST00000569144 DGAT1O75907 488 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 U2AF1L5P0DN76 240 aaPredicted RBP7.73□□□□□ -1.17
CDH13-212ENST00000569144 U2AF1Q01081 240 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDH13-212ENST00000569144 PTPN12Q05209 780 aaKnown RBP7.73□□□□□ -1.17
CDH13-212ENST00000569144 SF3B3Q15393 1217 aaKnown RBP7.73□□□□□ -1.17
CDH13-212ENST00000569144 PRAMEF18Q5VWM3 479 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 ARMC9Q7Z3E5 817 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 ADAM32Q8TC27 787 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 CD99L2Q8TCZ2 262 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 ZNF333Q96JL9 665 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
CDH13-212ENST00000569144 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 GDPD2Q9HCC8 539 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 PODXL2Q9NZ53 605 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 SCAF8Q9UPN6 1271 aaKnown RBP7.73□□□□□ -1.17
CDH13-212ENST00000569144 WASF2Q9Y6W5 498 aa7.73□□□□□ -1.17
CDH13-212ENST00000569144 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 UFL1O94874 794 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 ZBTB48P10074 688 aaPredicted RBP7.72□□□□□ -1.17
CDH13-212ENST00000569144 ABL2P42684 1182 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 NBPF9Q3BBW0 867 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 LDLRAD1Q5T700 205 aa7.72□□□□□ -1.17
CDH13-212ENST00000569144 SCN9AQ15858 1988 aa7.71□□□□□ -1.17
CDH13-212ENST00000569144 IGF2BP3O00425 579 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDH13-212ENST00000569144 RPS8P62241 208 aaKnown RBP7.71□□□□□ -1.18
CDH13-212ENST00000569144 PROSER3Q2NL68 480 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 COPS6Q7L5N1 327 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 NBPF11Q86T75 865 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
CDH13-212ENST00000569144 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 CDK15Q96Q40 435 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 GGA1Q9UJY5 639 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 COG6Q9Y2V7 657 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 CENPFP49454 3210 aa7.71□□□□□ -1.18
CDH13-212ENST00000569144 TAF1P21675 1872 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 COL4A1P02462 1669 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 USP17L3A6NCW0 530 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 USP17L4A6NCW7 530 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 WNT10BO00744 389 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 ADH1CP00326 375 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 ANXA1P04083 346 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 EIF2S2P20042 333 aaKnown RBP7.7□□□□□ -1.18
CDH13-212ENST00000569144 SP3Q02447 781 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 NR1H3Q13133 447 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 CRHR2Q13324 411 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 PRKG1Q13976 671 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 MAP3K11Q16584 847 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 SLC9C1Q4G0N8 1177 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 OTUD7BQ6GQQ9 843 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
CDH13-212ENST00000569144 USP17L1Q7RTZ2 530 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 PODNQ7Z5L7 613 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 POM121Q96HA1 1249 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
CDH13-212ENST00000569144 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
CDH13-212ENST00000569144 COL1A1P02452 1464 aaPredicted RBP7.69□□□□□ -1.18
CDH13-212ENST00000569144 UNCXA6NJT0 531 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 MMP14P50281 582 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 CAP1Q01518 475 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 AIMP1Q12904 312 aaKnown RBP7.69□□□□□ -1.18
CDH13-212ENST00000569144 IRF5Q13568 498 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 CNGB1Q14028 1251 aaPredicted RBP7.69□□□□□ -1.18
CDH13-212ENST00000569144 ARHGEF6Q15052 776 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
CDH13-212ENST00000569144 OGFOD1Q8N543 542 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 HPS1Q92902 700 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 PRO3102Q9H379 93 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 PTCH2Q9Y6C5 1203 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 MYO3BQ8WXR4 1341 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms