RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
SNX29-207ENST00000568949 ATRNL1Q5VV63 1379 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 PTPRAP18433 802 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 BMP8BP34820 402 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 DIXDC1Q155Q3 683 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 GPR153Q6NV75 609 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 LRCH3Q96II8 777 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 AFG3L2Q9Y4W6 797 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 PTPRFP10586 1907 aa15.62■□□□□ 0.09
SNX29-207ENST00000568949 DOCK2Q92608 1830 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 ALPK3Q96L96 1907 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 EYA2O00167 538 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 ENTPD3O75355 529 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 LDHBP07195 334 aaKnown RBP15.61■□□□□ 0.09
SNX29-207ENST00000568949 PRDX5P30044 214 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
SNX29-207ENST00000568949 GADL1Q6ZQY3 521 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 ZFPM1Q8IX07 1006 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 IDI2Q9BXS1 227 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 SALL1Q9NSC2 1324 aa15.61■□□□□ 0.09
SNX29-207ENST00000568949 MAP3K10Q02779 954 aa15.6■□□□□ 0.09
SNX29-207ENST00000568949 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
SNX29-207ENST00000568949 SMCR8Q8TEV9 937 aaPredicted RBP15.6■□□□□ 0.09
SNX29-207ENST00000568949 COA7Q96BR5 231 aa15.6■□□□□ 0.09
SNX29-207ENST00000568949 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
SNX29-207ENST00000568949 GDF15Q99988 308 aa15.6■□□□□ 0.09
SNX29-207ENST00000568949 ZBTB22O15209 634 aa15.59■□□□□ 0.09
SNX29-207ENST00000568949 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
SNX29-207ENST00000568949 RGS3P49796 1198 aa15.59■□□□□ 0.09
SNX29-207ENST00000568949 ANKLE1Q8NAG6 615 aa15.59■□□□□ 0.09
SNX29-207ENST00000568949 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
SNX29-207ENST00000568949 LRRFIP2Q9Y608 721 aaKnown RBP15.59■□□□□ 0.09
SNX29-207ENST00000568949 PHIPQ8WWQ0 1821 aa15.59■□□□□ 0.09
SNX29-207ENST00000568949 SEMA3EO15041 775 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 CTNND1O60716 968 aaKnown RBP15.58■□□□□ 0.08
SNX29-207ENST00000568949 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNX29-207ENST00000568949 USP44Q9H0E7 712 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 MRS2Q9HD23 443 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 AGTPBP1Q9UPW5 1226 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 DOCK1Q14185 1865 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 MYH2Q9UKX2 1941 aa15.58■□□□□ 0.08
SNX29-207ENST00000568949 FAM110CQ1W6H9 321 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 ANKRD13CQ8N6S4 541 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 DENND2AQ9ULE3 1009 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 GAKO14976 1311 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 PTPRCP08575 1304 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 RFX7Q2KHR2 1363 aa15.57■□□□□ 0.08
SNX29-207ENST00000568949 TRIM75PA6NK02 468 aa15.56■□□□□ 0.08
SNX29-207ENST00000568949 LRIT3Q3SXY7 679 aa15.56■□□□□ 0.08
SNX29-207ENST00000568949 ZSCAN29Q8IWY8 852 aaPredicted RBP15.56■□□□□ 0.08
SNX29-207ENST00000568949 ZGPATQ8N5A5 531 aaKnown RBP15.56■□□□□ 0.08
SNX29-207ENST00000568949 MRPL50Q8N5N7 158 aaKnown RBP15.56■□□□□ 0.08
SNX29-207ENST00000568949 DIS3LQ8TF46 1054 aaKnown RBP15.56■□□□□ 0.08
SNX29-207ENST00000568949 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
SNX29-207ENST00000568949 DDTLA6NHG4 134 aaPredicted RBP15.55■□□□□ 0.08
SNX29-207ENST00000568949 CIAO1O76071 339 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 HMGCRP04035 888 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 GCLCP48506 637 aaPredicted RBP15.55■□□□□ 0.08
SNX29-207ENST00000568949 ATP2B3Q16720 1220 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 SLF2Q8IX21 1173 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 C7orf61Q8IZ16 206 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 DEFB123Q8N688 67 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 PROCA1Q8NCQ7 364 aaPredicted RBP15.55■□□□□ 0.08
SNX29-207ENST00000568949 FAM163AQ96GL9 167 aaPredicted RBP15.55■□□□□ 0.08
SNX29-207ENST00000568949 NBPF3Q9H094 633 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 CEP126Q9P2H0 1117 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
SNX29-207ENST00000568949 RPTORQ8N122 1335 aa15.54■□□□□ 0.08
SNX29-207ENST00000568949 TBC1D12O60347 775 aa15.54■□□□□ 0.08
SNX29-207ENST00000568949 ZMYND8Q9ULU4 1186 aaPredicted RBP15.54■□□□□ 0.08
SNX29-207ENST00000568949 LAMA3Q16787 3333 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
SNX29-207ENST00000568949 PHKA1P46020 1223 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 TREML2Q5T2D2 321 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 TBC1D2Q9BYX2 928 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 HMX1Q9NP08 348 aaPredicted RBP15.53■□□□□ 0.08
SNX29-207ENST00000568949 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
SNX29-207ENST00000568949 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 COL6A3P12111 3177 aa15.53■□□□□ 0.08
SNX29-207ENST00000568949 PDS5AQ29RF7 1337 aaKnown RBP15.52■□□□□ 0.08
SNX29-207ENST00000568949 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX29-207ENST00000568949 DZIP1Q86YF9 867 aaKnown RBP15.52■□□□□ 0.08
SNX29-207ENST00000568949 TDHQ8IZJ6 230 aa15.52■□□□□ 0.08
SNX29-207ENST00000568949 OSBPL5Q9H0X9 879 aaPredicted RBP15.52■□□□□ 0.08
SNX29-207ENST00000568949 C11orf49Q9H6J7 331 aa15.52■□□□□ 0.08
SNX29-207ENST00000568949 OGDHLQ9ULD0 1010 aa15.52■□□□□ 0.08
SNX29-207ENST00000568949 LOC285556D6RIA3 1793 aa15.52■□□□□ 0.07
SNX29-207ENST00000568949 SLURP2P0DP57 97 aa15.51■□□□□ 0.07
SNX29-207ENST00000568949 MAGEA10P43363 369 aaPredicted RBP15.51■□□□□ 0.07
SNX29-207ENST00000568949 SPP2Q13103 211 aa15.51■□□□□ 0.07
SNX29-207ENST00000568949 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
SNX29-207ENST00000568949 CCDC84Q86UT8 332 aaPredicted RBP15.51■□□□□ 0.07
SNX29-207ENST00000568949 MTMR10Q9NXD2 777 aa15.51■□□□□ 0.07
SNX29-207ENST00000568949 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.51■□□□□ 0.07
SNX29-207ENST00000568949 DDX60LQ5H9U9 1706 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms