RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 COL6A1P12109 1028 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 NFIAQ12857 509 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
VPS9D1-207ENST00000568691 LDHAL6AQ6ZMR3 332 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 LINS1Q8NG48 757 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 MRIQ9BWK5 157 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 GJD2Q9UKL4 321 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 OGDHLQ9ULD0 1010 aa15□□□□□ -0.01
VPS9D1-207ENST00000568691 DNAH12Q6ZR08 3092 aa14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 FAM151AQ8WW52 585 aa14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 CDX2Q99626 313 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
VPS9D1-207ENST00000568691 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 FLIIQ13045 1269 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 LRRC26Q2I0M4 334 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 DNAAF4Q8WXU2 420 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 AFG3L2Q9Y4W6 797 aa14.98□□□□□ -0.01
VPS9D1-207ENST00000568691 HMGCRP04035 888 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 PTPRAP18433 802 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 TCP10Q12799 353 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 ANKRD13CQ8N6S4 541 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 MAFAQ8NHW3 353 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 CNNM1Q9NRU3 951 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 SLC45A1Q9Y2W3 748 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 SUPT16HQ9Y5B9 1047 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 ZHX2Q9Y6X8 837 aa14.97□□□□□ -0.01
VPS9D1-207ENST00000568691 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 CCDC84Q86UT8 332 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 TRIB2Q92519 343 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 KAZALD1Q96I82 304 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 TMOD2Q9NZR1 351 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 PLXNB2O15031 1838 aa14.96□□□□□ -0.01
VPS9D1-207ENST00000568691 TREML2Q5T2D2 321 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 BEND3Q5T5X7 828 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 GADL1Q6ZQY3 521 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 SH3BP5LQ7L8J4 393 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 FASTKD5Q7L8L6 764 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 TTYH1Q9H313 450 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 DAGLAQ9Y4D2 1042 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 PTPRFP10586 1907 aa14.95□□□□□ -0.02
VPS9D1-207ENST00000568691 F6X3S4 739 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 FAM110CQ1W6H9 321 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 CCDC57Q2TAC2 916 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 SCYL3Q8IZE3 742 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 VGLL2Q8N8G2 317 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 TBC1D22AQ8WUA7 517 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 MYLIPQ8WY64 445 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 COA7Q96BR5 231 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 STK31Q9BXU1 1019 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 HMX1Q9NP08 348 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
VPS9D1-207ENST00000568691 DIXDC1Q155Q3 683 aa14.93□□□□□ -0.02
VPS9D1-207ENST00000568691 LHX8Q68G74 356 aa14.93□□□□□ -0.02
VPS9D1-207ENST00000568691 PEX10O60683 326 aa14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 LRRC24Q50LG9 513 aa14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 ZNF697Q5TEC3 545 aa14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 SMCR8Q8TEV9 937 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 AGTPBP1Q9UPW5 1226 aa14.92□□□□□ -0.02
VPS9D1-207ENST00000568691 RFX7Q2KHR2 1363 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 CHMP4AQ9BY43 222 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 SUGT1Q9Y2Z0 365 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
VPS9D1-207ENST00000568691 TRIM75PA6NK02 468 aa14.9□□□□□ -0.02
VPS9D1-207ENST00000568691 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-207ENST00000568691 C9orf50Q5SZB4 431 aa14.9□□□□□ -0.02
VPS9D1-207ENST00000568691 SUCLG2Q96I99 432 aa14.9□□□□□ -0.02
VPS9D1-207ENST00000568691 GRM8O00222 908 aa14.89□□□□□ -0.03
VPS9D1-207ENST00000568691 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-207ENST00000568691 PLA2G5P39877 138 aa14.89□□□□□ -0.03
VPS9D1-207ENST00000568691 SHHQ15465 462 aa14.89□□□□□ -0.03
VPS9D1-207ENST00000568691 MAST3O60307 1309 aa14.89□□□□□ -0.03
VPS9D1-207ENST00000568691 DDTLA6NHG4 134 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 FGFR2P21802 821 aa14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 PRDX5P30044 214 aa14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 CACNB2Q08289 660 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 VPS37DQ86XT2 251 aa14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 PICK1Q9NRD5 415 aa14.88□□□□□ -0.03
VPS9D1-207ENST00000568691 MROH5Q6ZUA9 1318 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms