RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 PPP6R2O75170 966 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 TRIM28Q13263 835 aaKnown RBP21.12■□□□□ 0.97
PKD1-235ENST00000568591 NLRP10Q86W26 655 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 GRAMD1CQ8IYS0 662 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 WDR19Q8NEZ3 1342 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 TIGD1Q96MW7 591 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 ZSWIM5Q9P217 1185 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 FBXO3Q9UK99 471 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 KCNH3Q9ULD8 1083 aa21.12■□□□□ 0.97
PKD1-235ENST00000568591 TCRBV5S4A2TA0A5A2 114 aa21.11■□□□□ 0.97
PKD1-235ENST00000568591 TRIM65Q6PJ69 517 aa21.11■□□□□ 0.97
PKD1-235ENST00000568591 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
PKD1-235ENST00000568591 TMOD3Q9NYL9 352 aa21.11■□□□□ 0.97
PKD1-235ENST00000568591 PIGBQ92521 554 aa21.11■□□□□ 0.97
PKD1-235ENST00000568591 STRBPQ96SI9 672 aaKnown RBP21.11■□□□□ 0.97
PKD1-235ENST00000568591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.11■□□□□ 0.973e-7■■■■□ 26.2
PKD1-235ENST00000568591 MYH7P12883 1935 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 KIF2AO00139 706 aaPredicted RBP21.1■□□□□ 0.97
PKD1-235ENST00000568591 PRR29P0C7W0 189 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 TOB1P50616 345 aaPredicted RBP21.1■□□□□ 0.97
PKD1-235ENST00000568591 CTSWP56202 376 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 KRBA2Q6ZNG9 492 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 KRT222Q8N1A0 295 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 PRKAB2O43741 272 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.97
PKD1-235ENST00000568591 VSTM4Q8IW00 320 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 TRMT44Q8IYL2 757 aaKnown RBP21.1■□□□□ 0.97
PKD1-235ENST00000568591 AIDAQ96BJ3 306 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 EPC1Q9H2F5 836 aa21.1■□□□□ 0.97
PKD1-235ENST00000568591 KIF20AO95235 890 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 ETF1P62495 437 aaKnown RBP21.09■□□□□ 0.97
PKD1-235ENST00000568591 RRP12Q5JTH9 1297 aaKnown RBP21.09■□□□□ 0.97
PKD1-235ENST00000568591 REXO1L1PQ8IX06 675 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 ARMT1Q9H993 441 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 COL5A2P05997 1499 aaPredicted RBP21.09■□□□□ 0.97
PKD1-235ENST00000568591 PAPPAQ13219 1627 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 ANKRD18BA2A2Z9 1011 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 IRS4O14654 1257 aaPredicted RBP21.09■□□□□ 0.97
PKD1-235ENST00000568591 CDKL5O76039 1030 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 PDE8BO95263 885 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 ATP2B1P20020 1258 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 ARHGAP29Q52LW3 1261 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 GIGYF2Q6Y7W6 1299 aaKnown RBP21.09■□□□□ 0.97
PKD1-235ENST00000568591 CADPS2Q86UW7 1296 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 SEC31BQ9NQW1 1179 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 FAM53CQ9NYF3 392 aa21.09■□□□□ 0.97
PKD1-235ENST00000568591 MAP3K15Q6ZN16 1313 aa21.08■□□□□ 0.97
PKD1-235ENST00000568591 IFIT3O14879 490 aaKnown RBP21.08■□□□□ 0.97
PKD1-235ENST00000568591 H2AFXP16104 143 aaPredicted RBP21.08■□□□□ 0.97
PKD1-235ENST00000568591 CLCN6P51797 869 aa21.08■□□□□ 0.97
PKD1-235ENST00000568591 TMEM139Q8IV31 216 aa21.08■□□□□ 0.97
PKD1-235ENST00000568591 JMYQ8N9B5 988 aa21.08■□□□□ 0.97
PKD1-235ENST00000568591 ECM29Q5VYK3 1845 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 MBD4O95243 580 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 TOP1P11387 765 aaKnown RBP21.08■□□□□ 0.96
PKD1-235ENST00000568591 NR5A1Q13285 461 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 USP49Q70CQ1 688 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 MAGEB6Q8N7X4 407 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 PDILTQ8N807 584 aa21.08■□□□□ 0.96
PKD1-235ENST00000568591 ABCC12Q96J65 1359 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 FAM237AA0A1B0GTK4 181 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 SMIM22K7EJ46 135 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 TRIM29Q14134 588 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 CPLX2Q6PUV4 134 aaKnown RBP21.07■□□□□ 0.96
PKD1-235ENST00000568591 BRINP3Q76B58 766 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 SLC12A7Q9Y666 1083 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 KCNJ6P48051 423 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 MDM2Q00987 491 aaPredicted RBP21.07■□□□□ 0.96
PKD1-235ENST00000568591 TERF2Q15554 542 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 IFNL3Q8IZI9 196 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 MED15Q96RN5 788 aa21.07■□□□□ 0.96
PKD1-235ENST00000568591 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.07■□□□□ 0.96
PKD1-235ENST00000568591 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
PKD1-235ENST00000568591 ATRNO75882 1429 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 CUTAO60888 179 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 ADKP55263 362 aaKnown RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 GABPB1Q06547 395 aaPredicted RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 SGMS1Q86VZ5 419 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 NOSTRINQ8IVI9 506 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 TMEM87BQ96K49 555 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 MAN1B1Q9UKM7 699 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 TOGARAM1Q9Y4F4 1720 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 POLR2DO15514 142 aaKnown RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 URI1O94763 535 aaPredicted RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 DIS3L2Q8IYB7 885 aaKnown RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 KRI1Q8N9T8 703 aaKnown RBP21.06■□□□□ 0.96
PKD1-235ENST00000568591 OXER1Q8TDS5 423 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 NAPBQ9H115 298 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 TBC1D2BQ9UPU7 963 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 PCDHB6Q9Y5E3 794 aa21.06■□□□□ 0.96
PKD1-235ENST00000568591 VWA3AA6NCI4 1184 aa21.05■□□□□ 0.96
PKD1-235ENST00000568591 SSRP1Q08945 709 aaKnown RBP21.05■□□□□ 0.96
PKD1-235ENST00000568591 RASGRF1Q13972 1273 aa21.05■□□□□ 0.96
PKD1-235ENST00000568591 TTF1Q15361 905 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms