RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 DDTLA6NHG4 134 aaPredicted RBP19.25■□□□□ 0.67
NME3-211ENST00000568561 SRGAP3O43295 1099 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 GNRH1P01148 92 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
NME3-211ENST00000568561 BTDP43251 543 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
NME3-211ENST00000568561 GPAT2Q6NUI2 795 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 SCYL3Q8IZE3 742 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 ZGPATQ8N5A5 531 aaKnown RBP19.25■□□□□ 0.67
NME3-211ENST00000568561 XAGE2Q96GT9 111 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 PARK7Q99497 189 aaKnown RBP19.25■□□□□ 0.67
NME3-211ENST00000568561 IDI2Q9BXS1 227 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 ZHX2Q9Y6X8 837 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 ATAD5Q96QE3 1844 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
NME3-211ENST00000568561 ENTPD3O75355 529 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 PRMT2P55345 433 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 PI16Q6UXB8 463 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 CCDC84Q86UT8 332 aaPredicted RBP19.24■□□□□ 0.67
NME3-211ENST00000568561 RAET1EQ8TD07 263 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 SHISA4Q96DD7 197 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 PICK1Q9NRD5 415 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 MROH7-TTC4A0A0A0MT08 1334 aa19.24■□□□□ 0.67
NME3-211ENST00000568561 FAM196BA6NMK8 535 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 CXCL11O14625 94 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 BCRP11274 1271 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 PTPRAP18433 802 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 GADL1Q6ZQY3 521 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
NME3-211ENST00000568561 PDS5AQ29RF7 1337 aaKnown RBP19.23■□□□□ 0.67
NME3-211ENST00000568561 A0A0G2JLL6 359 aaPredicted RBP19.22■□□□□ 0.67
NME3-211ENST00000568561 MECOMQ03112 1051 aa19.22■□□□□ 0.67
NME3-211ENST00000568561 PRKCZQ05513 592 aa19.22■□□□□ 0.67
NME3-211ENST00000568561 PRRT2Q7Z6L0 340 aaPredicted RBP19.22■□□□□ 0.67
NME3-211ENST00000568561 NEUROD6Q96NK8 337 aa19.22■□□□□ 0.67
NME3-211ENST00000568561 TRIM75PA6NK02 468 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 GNAI3P08754 354 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 GRK4P32298 578 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
NME3-211ENST00000568561 TBC1D9Q6ZT07 1266 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 GABRQQ9UN88 632 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 AFG3L2Q9Y4W6 797 aa19.21■□□□□ 0.67
NME3-211ENST00000568561 H0YGN5 161 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 HOXD10P28358 340 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 RHBDL3P58872 404 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
NME3-211ENST00000568561 ERICH6Q7L0X2 663 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 SLF2Q8IX21 1173 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 HMG20BQ9P0W2 317 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
NME3-211ENST00000568561 COLQQ9Y215 455 aaPredicted RBP19.2■□□□□ 0.66
NME3-211ENST00000568561 AKAP2Q9Y2D5 859 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 DOCK3Q8IZD9 2030 aa19.2■□□□□ 0.66
NME3-211ENST00000568561 LOC285556D6RIA3 1793 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 ZBTB22O15209 634 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 CCL5P13501 91 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 FCGRTP55899 365 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 MTX1Q13505 466 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 FASTKD5Q7L8L6 764 aaKnown RBP19.19■□□□□ 0.66
NME3-211ENST00000568561 FAM163AQ96GL9 167 aaPredicted RBP19.19■□□□□ 0.66
NME3-211ENST00000568561 CDK5RAP2Q96SN8 1893 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 MYO5AQ9Y4I1 1855 aaKnown RBP19.19■□□□□ 0.66
NME3-211ENST00000568561 MAST2Q6P0Q8 1798 aa19.19■□□□□ 0.66
NME3-211ENST00000568561 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 TRIM27P14373 513 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 GORABQ5T7V8 394 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 SPATA5Q8NB90 893 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 FRAT1Q92837 279 aaPredicted RBP19.18■□□□□ 0.66
NME3-211ENST00000568561 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
NME3-211ENST00000568561 PNMA6EA0A0J9YXQ4 647 aa19.17■□□□□ 0.66
NME3-211ENST00000568561 CTNND1O60716 968 aaKnown RBP19.17■□□□□ 0.66
NME3-211ENST00000568561 FXR1P51114 621 aaKnown RBP eCLIP19.17■□□□□ 0.66
NME3-211ENST00000568561 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
NME3-211ENST00000568561 RAI14Q9P0K7 980 aa19.17■□□□□ 0.66
NME3-211ENST00000568561 BCAR3O75815 825 aa19.16■□□□□ 0.66
NME3-211ENST00000568561 ELNP15502 786 aa19.16■□□□□ 0.66
NME3-211ENST00000568561 TREML2Q5T2D2 321 aa19.16■□□□□ 0.66
NME3-211ENST00000568561 SMCR8Q8TEV9 937 aaPredicted RBP19.16■□□□□ 0.66
NME3-211ENST00000568561 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
NME3-211ENST00000568561 UNC93B1Q9H1C4 597 aa19.16■□□□□ 0.66
NME3-211ENST00000568561 GNAI2P04899 355 aa19.15■□□□□ 0.66
NME3-211ENST00000568561 MCAMP43121 646 aa19.15■□□□□ 0.66
NME3-211ENST00000568561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.15■□□□□ 0.66
NME3-211ENST00000568561 RANBP2P49792 3224 aaKnown RBP19.15■□□□□ 0.66
NME3-211ENST00000568561 FOCADQ5VW36 1801 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 TNPO2O14787 897 aaKnown RBP19.14■□□□□ 0.65
NME3-211ENST00000568561 ADCY3O60266 1144 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 GJB1P08034 283 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 ARID4AP29374 1257 aaPredicted RBP19.14■□□□□ 0.65
NME3-211ENST00000568561 GJA8P48165 433 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 FLT3LGP49771 235 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 UBXN2AP68543 259 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
NME3-211ENST00000568561 ATF7IPQ6VMQ6 1270 aa19.14■□□□□ 0.65
NME3-211ENST00000568561 ANKRD13CQ8N6S4 541 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms