RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 POTEBQ6S5H4 581 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
ATXN3-250ENST00000568290 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 FMR1NBQ8N0W7 255 aaPredicted RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 ANKRD7Q92527 254 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 LPIN2Q92539 896 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 DDX12PQ92771 950 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 TCEANC2Q96MN5 208 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 ZNF830Q96NB3 372 aaPredicted RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.8□□□□□ -1
ATXN3-250ENST00000568290 PCDHA7Q9UN72 937 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 TNS2Q63HR2 1409 aa8.8□□□□□ -1
ATXN3-250ENST00000568290 C5P01031 1676 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 RTL9Q8NET4 1388 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 FAM237AA0A1B0GTK4 181 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 GPAA1O43292 621 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 ZNF202O95125 648 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 SLU7O95391 586 aaKnown RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 FGAP02671 866 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 APPP05067 770 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CALM1P0DP23 149 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CALM2P0DP24 149 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CALM3P0DP25 149 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 MYL5Q02045 173 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 GABPB1Q06547 395 aaPredicted RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 PUM3Q15397 648 aaKnown RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 PARP10Q53GL7 1025 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CCDC129Q6ZRS4 1044 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 FILIP1Q7Z7B0 1213 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 SGMS1Q86VZ5 419 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 MLKLQ8NB16 471 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 ANKRD20A12PQ8NF67 263 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 ZNF397Q8NF99 534 aaPredicted RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 MARVELD3Q96A59 401 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CTAGE1Q96RT6 745 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 CDC5LQ99459 802 aaKnown RBP8.79□□□□□ -1
ATXN3-250ENST00000568290 ALG1Q9BT22 464 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 SLC12A7Q9Y666 1083 aa8.79□□□□□ -1
ATXN3-250ENST00000568290 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 NBPF26B4DH59 902 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 ATP8B1O43520 1251 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 SERPINC1P01008 464 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 TUBBP07437 444 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 ADD2P35612 726 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 CTSWP56202 376 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 SLC9C2Q5TAH2 1124 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 NBPF14Q5TI25 921 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 JAKMIP3Q5VZ66 844 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 FAM173BQ6P4H8 233 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 STOX1Q6ZVD7 989 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 FAM177A1Q8N128 213 aaPredicted RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 NBPF15Q8N660 670 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 AOPEPQ8N6M6 819 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 OSBP2Q969R2 916 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 EDC3Q96F86 508 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 C16orf45Q96MC5 204 aaPredicted RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 SEC62Q99442 399 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 EPAS1Q99814 870 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 NAA15Q9BXJ9 866 aaKnown RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 NAPBQ9H115 298 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 FOXP1Q9H334 677 aaPredicted RBP8.78□□□□□ -1
ATXN3-250ENST00000568290 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 PYCARDQ9ULZ3 195 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 COL18A1P39060 1754 aa8.78□□□□□ -1
ATXN3-250ENST00000568290 PDE8BO95263 885 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 DEXIO95424 95 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 CTDNEP1O95476 244 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 U2AF2P26368 475 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 ARID4AP29374 1257 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 IGHMBP2P38935 993 aaKnown RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 IL6STP40189 918 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 KIF23Q02241 960 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 BMS1Q14692 1282 aaKnown RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 FILIP1LQ4L180 1135 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC178Q5BJE1 867 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 TEX35Q5T0J7 233 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 MFSD6Q6ZSS7 791 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 TTLL7Q6ZT98 887 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 HOMER1Q86YM7 354 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 CCAR2Q8N163 923 aaKnown RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 CNNM3Q8NE01 707 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 CACTINQ8WUQ7 758 aaKnown RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 RBM28Q9NW13 759 aaKnown RBP8.77□□□□□ -1.01
ATXN3-250ENST00000568290 TUBE1Q9UJT0 475 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 PHLPP2Q6ZVD8 1323 aa8.77□□□□□ -1.01
ATXN3-250ENST00000568290 NID2Q14112 1375 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 M0R2C6 588 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 SH2B2O14492 632 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms