RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 MGAMO43451 1857 aa14.94□□□□□ -0.02
CLK3-222ENST00000568232 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 CXCL11O14625 94 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
CLK3-222ENST00000568232 TRIM32Q13049 653 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 TWISTNBQ3B726 338 aaPredicted RBP14.93□□□□□ -0.02
CLK3-222ENST00000568232 NOL9Q5SY16 702 aaKnown RBP14.93□□□□□ -0.02
CLK3-222ENST00000568232 VPS37DQ86XT2 251 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 FAM151AQ8WW52 585 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 NBPF3Q9H094 633 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 PRDM6Q9NQX0 595 aa14.93□□□□□ -0.02
CLK3-222ENST00000568232 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
CLK3-222ENST00000568232 POTEB2H3BUK9 544 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 GADL1Q6ZQY3 521 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 ANKLE1Q8NAG6 615 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 MRIQ9BWK5 157 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 C11orf49Q9H6J7 331 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 ZHX2Q9Y6X8 837 aa14.92□□□□□ -0.02
CLK3-222ENST00000568232 A0A0G2JLL6 359 aaPredicted RBP14.91□□□□□ -0.02
CLK3-222ENST00000568232 F6X3S4 739 aa14.91□□□□□ -0.02
CLK3-222ENST00000568232 MDM2Q00987 491 aaPredicted RBP14.91□□□□□ -0.02
CLK3-222ENST00000568232 NFIAQ12857 509 aa14.91□□□□□ -0.02
CLK3-222ENST00000568232 PRRT2Q7Z6L0 340 aaPredicted RBP14.91□□□□□ -0.02
CLK3-222ENST00000568232 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
CLK3-222ENST00000568232 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
CLK3-222ENST00000568232 HHIPL2Q6UWX4 724 aa14.9□□□□□ -0.02
CLK3-222ENST00000568232 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
CLK3-222ENST00000568232 ZFPM1Q8IX07 1006 aa14.9□□□□□ -0.02
CLK3-222ENST00000568232 SMCR8Q8TEV9 937 aaPredicted RBP14.9□□□□□ -0.02
CLK3-222ENST00000568232 COA7Q96BR5 231 aa14.9□□□□□ -0.02
CLK3-222ENST00000568232 PFASO15067 1338 aa14.9□□□□□ -0.02
CLK3-222ENST00000568232 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 SLURP2P0DP57 97 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 PTPRAP18433 802 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.89□□□□□ -0.03
CLK3-222ENST00000568232 FAM198AQ9UFP1 575 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
CLK3-222ENST00000568232 PHF20L1A8MW92 1017 aa14.88□□□□□ -0.03
CLK3-222ENST00000568232 HMGCRP04035 888 aa14.88□□□□□ -0.03
CLK3-222ENST00000568232 CAVIN4Q5BKX8 364 aa14.88□□□□□ -0.03
CLK3-222ENST00000568232 FAM109BQ6ICB4 259 aaPredicted RBP14.88□□□□□ -0.03
CLK3-222ENST00000568232 SCYL3Q8IZE3 742 aa14.88□□□□□ -0.03
CLK3-222ENST00000568232 HMX1Q9NP08 348 aaPredicted RBP14.88□□□□□ -0.03
CLK3-222ENST00000568232 DDX60LQ5H9U9 1706 aaKnown RBP14.87□□□□□ -0.03
CLK3-222ENST00000568232 MUC3AQ02505 3323 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 GRM8O00222 908 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 DIXDC1Q155Q3 683 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 LRRC24Q50LG9 513 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
CLK3-222ENST00000568232 PICK1Q9NRD5 415 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 OGDHLQ9ULD0 1010 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 DAGLAQ9Y4D2 1042 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 MAST3O60307 1309 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 MROH5Q6ZUA9 1318 aa14.87□□□□□ -0.03
CLK3-222ENST00000568232 TRIM75PA6NK02 468 aa14.86□□□□□ -0.03
CLK3-222ENST00000568232 LRRC26Q2I0M4 334 aa14.86□□□□□ -0.03
CLK3-222ENST00000568232 TREML2Q5T2D2 321 aa14.86□□□□□ -0.03
CLK3-222ENST00000568232 GJD2Q9UKL4 321 aa14.86□□□□□ -0.03
CLK3-222ENST00000568232 ATRNL1Q5VV63 1379 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 METTL24Q5JXM2 366 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 TRIB2Q92519 343 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 KAZALD1Q96I82 304 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 CDX2Q99626 313 aaPredicted RBP14.85□□□□□ -0.03
CLK3-222ENST00000568232 USP40Q9NVE5 1235 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
CLK3-222ENST00000568232 CDH23Q9H251 3354 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 COL6A1P12109 1028 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 COL9A1P20849 921 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 FAM110CQ1W6H9 321 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
CLK3-222ENST00000568232 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
CLK3-222ENST00000568232 RAPGEFL1Q9UHV5 662 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
CLK3-222ENST00000568232 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
CLK3-222ENST00000568232 PDE8BO95263 885 aa14.83□□□□□ -0.04
CLK3-222ENST00000568232 ZNF697Q5TEC3 545 aa14.83□□□□□ -0.04
CLK3-222ENST00000568232 SH3BP5LQ7L8J4 393 aa14.83□□□□□ -0.04
CLK3-222ENST00000568232 LRRFIP2Q9Y608 721 aaKnown RBP14.83□□□□□ -0.04
CLK3-222ENST00000568232 DOCK3Q8IZD9 2030 aa14.82□□□□□ -0.04
CLK3-222ENST00000568232 CYP2B6P20813 491 aa14.82□□□□□ -0.04
CLK3-222ENST00000568232 PRDX5P30044 214 aa14.82□□□□□ -0.04
CLK3-222ENST00000568232 MAP3K21Q5TCX8 1036 aa14.82□□□□□ -0.04
CLK3-222ENST00000568232 VAMP4O75379 141 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 RGS3P49796 1198 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
CLK3-222ENST00000568232 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 SEMA6BQ9H3T3 888 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 AK9Q5TCS8 1911 aa14.81□□□□□ -0.04
CLK3-222ENST00000568232 DDTLA6NHG4 134 aaPredicted RBP14.8□□□□□ -0.04
CLK3-222ENST00000568232 PEX10O60683 326 aa14.8□□□□□ -0.04
CLK3-222ENST00000568232 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
CLK3-222ENST00000568232 NBPF7P0C2Y1 421 aaPredicted RBP14.8□□□□□ -0.04
CLK3-222ENST00000568232 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms