RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CUTAO60888 179 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
PALB2-206ENST00000568219 CABP4P57796 275 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
PALB2-206ENST00000568219 TEX33O43247 280 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 SLC39A14Q15043 492 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 WASF1Q92558 559 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 ZNF274Q96GC6 653 aaPredicted RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 UNC13BO14795 1591 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 MRPL44Q9H9J2 332 aaKnown RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 ABCF2Q9UG63 623 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 GCKRQ14397 625 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 ZNF174Q15697 407 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 SLC4A8Q2Y0W8 1093 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 ENGASEQ8NFI3 743 aa12.33□□□□□ -0.44
PALB2-206ENST00000568219 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
PALB2-206ENST00000568219 KRT86O43790 486 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
PALB2-206ENST00000568219 FGAP02671 866 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 FBXW10Q5XX13 1052 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 RBM43Q6ZSC3 357 aaKnown RBP12.32□□□□□ -0.44
PALB2-206ENST00000568219 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 KIF5AQ12840 1032 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 KANK3Q6NY19 840 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
PALB2-206ENST00000568219 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 FAM170AA1A519 330 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
PALB2-206ENST00000568219 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
PALB2-206ENST00000568219 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 HDAC6Q9UBN7 1215 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
PALB2-206ENST00000568219 CEP152O94986 1710 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
PALB2-206ENST00000568219 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 CAPS2Q9BXY5 557 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 GPTP24298 496 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 CDC25AP30304 524 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 ARID5AQ03989 594 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 TADA2BQ86TJ2 420 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 ANKRD13CQ8N6S4 541 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 PNKPQ96T60 521 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 TRIM75PA6NK02 468 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 ZRANB2O95218 330 aaKnown RBP eCLIP12.31□□□□□ -0.44
PALB2-206ENST00000568219 CTDNEP1O95476 244 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 CCDC42Q96M95 316 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
PALB2-206ENST00000568219 ANGEL1Q9UNK9 670 aaKnown RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
PALB2-206ENST00000568219 A0A087WUV0 522 aaPredicted RBP12.3□□□□□ -0.44
PALB2-206ENST00000568219 KIF28PB7ZC32 967 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 OPA1O60313 960 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CCDC178Q5BJE1 867 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CYP26C1Q6V0L0 522 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 TMTC1Q8IUR5 882 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
PALB2-206ENST00000568219 MED4Q9NPJ6 270 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 PPANQ9NQ55 473 aaKnown RBP12.3□□□□□ -0.44
PALB2-206ENST00000568219 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 RTN1Q16799 776 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
PALB2-206ENST00000568219 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 GPAA1O43292 621 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CXCR5P32302 372 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CFAP58Q5T655 872 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms