RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 LRP2BPQ9P2M1 347 aa13.7□□□□□ -0.22
CDH3-206ENST00000567674 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
CDH3-206ENST00000567674 CXCL11O14625 94 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
CDH3-206ENST00000567674 GNRH1P01148 92 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 BTDP43251 543 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
CDH3-206ENST00000567674 ZNF296Q8WUU4 475 aaPredicted RBP13.69□□□□□ -0.22
CDH3-206ENST00000567674 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 KCNH4Q9UQ05 1017 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
CDH3-206ENST00000567674 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 GJA5P36382 358 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 RGS3P49796 1198 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 CACNB3P54284 484 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 RHBDL3P58872 404 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 NFIAQ12857 509 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
CDH3-206ENST00000567674 PANK1Q8TE04 598 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 RAI14Q9P0K7 980 aa13.68□□□□□ -0.22
CDH3-206ENST00000567674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
CDH3-206ENST00000567674 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDH3-206ENST00000567674 DLL1O00548 723 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
CDH3-206ENST00000567674 METTL16Q86W50 562 aaKnown RBP13.67□□□□□ -0.22
CDH3-206ENST00000567674 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 EAF2Q96CJ1 260 aaPredicted RBP13.67□□□□□ -0.22
CDH3-206ENST00000567674 PTPN18Q99952 460 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 HERC5Q9UII4 1024 aaKnown RBP13.67□□□□□ -0.22
CDH3-206ENST00000567674 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
CDH3-206ENST00000567674 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 SLC45A1Q9Y2W3 748 aa13.67□□□□□ -0.22
CDH3-206ENST00000567674 IRF6O14896 467 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
CDH3-206ENST00000567674 FASTKD5Q7L8L6 764 aaKnown RBP13.66□□□□□ -0.22
CDH3-206ENST00000567674 ANKRD23Q86SG2 305 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 FOXP4Q8IVH2 680 aaPredicted RBP13.66□□□□□ -0.22
CDH3-206ENST00000567674 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 ZNF384Q8TF68 577 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 OSBPL5Q9H0X9 879 aaPredicted RBP13.66□□□□□ -0.22
CDH3-206ENST00000567674 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
CDH3-206ENST00000567674 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
CDH3-206ENST00000567674 CCL15-CCL14A0A0B4J2E2 113 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 TLR2O60603 784 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 PRMT2P55345 433 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 SP3Q02447 781 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 TCP10Q12799 353 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
CDH3-206ENST00000567674 AAMPQ13685 434 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 CCL15Q16663 113 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
CDH3-206ENST00000567674 C1orf115Q9H7X2 142 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
CDH3-206ENST00000567674 CRHR2Q13324 411 aa13.64□□□□□ -0.23
CDH3-206ENST00000567674 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
CDH3-206ENST00000567674 PTPRAP18433 802 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 INPP5BP32019 993 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 ZAP70P43403 619 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
CDH3-206ENST00000567674 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 AACSQ86V21 672 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 OTOFQ9HC10 1997 aa13.63□□□□□ -0.23
CDH3-206ENST00000567674 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
CDH3-206ENST00000567674 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
CDH3-206ENST00000567674 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
CDH3-206ENST00000567674 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
CDH3-206ENST00000567674 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
CDH3-206ENST00000567674 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
CDH3-206ENST00000567674 DDX4Q9NQI0 724 aaKnown RBP13.62□□□□□ -0.23
CDH3-206ENST00000567674 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
CDH3-206ENST00000567674 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
CDH3-206ENST00000567674 A0A0G2JLL6 359 aaPredicted RBP13.61□□□□□ -0.23
CDH3-206ENST00000567674 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
CDH3-206ENST00000567674 CAPN2P17655 700 aa13.61□□□□□ -0.23
CDH3-206ENST00000567674 ATP5JP18859 108 aa13.61□□□□□ -0.23
CDH3-206ENST00000567674 KIF22Q14807 665 aa13.61□□□□□ -0.23
CDH3-206ENST00000567674 PRRT2Q7Z6L0 340 aaPredicted RBP13.61□□□□□ -0.23
CDH3-206ENST00000567674 PROCA1Q8NCQ7 364 aaPredicted RBP13.61□□□□□ -0.23
CDH3-206ENST00000567674 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
CDH3-206ENST00000567674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH3-206ENST00000567674 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
CDH3-206ENST00000567674 ASNSP08243 561 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 CAP2P40123 477 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 PICALMQ13492 652 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 C17orf99Q6UX52 265 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 OTOP1Q7RTM1 612 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms