RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HSP90AB4PQ58FF6 505 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 CTU1Q7Z7A3 348 aaKnown RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 NSUN4Q96CB9 384 aaKnown RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 OTUD5Q96G74 571 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 PTPN18Q99952 460 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 R3HDMLQ9H3Y0 253 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 SNRKQ9NRH2 765 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 ZNF112Q9UJU3 913 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 SNCAIPQ9Y6H5 919 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 CDK5RAP2Q96SN8 1893 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 HMMRO75330 724 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 CETPP11597 493 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 INPP5BP32019 993 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 PDE3AQ14432 1141 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-209ENST00000567635 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-209ENST00000567635 EXOC6BQ9Y2D4 811 aa8.47□□□□□ -1.05
SF3B3-209ENST00000567635 KIAA0100Q14667 2235 aaKnown RBP8.47□□□□□ -1.05
SF3B3-209ENST00000567635 MYH1P12882 1939 aa8.46□□□□□ -1.05
SF3B3-209ENST00000567635 CCL15-CCL14A0A0B4J2E2 113 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 IRF6O14896 467 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 IGSF3O75054 1194 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 WDHD1O75717 1129 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 BAG3O95817 575 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 ZAP70P43403 619 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 RHBDL3P58872 404 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 PPATQ06203 517 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 CRHR2Q13324 411 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 PPIL2Q13356 520 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 SNAPC2Q13487 334 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 PICALMQ13492 652 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 CCL15Q16663 113 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 NAA16Q6N069 864 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 AACSQ86V21 672 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 SIRT2Q8IXJ6 389 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 RHPN1Q8TCX5 695 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 DDX4Q9NQI0 724 aaKnown RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 DBNLQ9UJU6 430 aaKnown RBP8.46□□□□□ -1.06
SF3B3-209ENST00000567635 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.06
SF3B3-209ENST00000567635 FOCADQ5VW36 1801 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PTPRFP10586 1907 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PDE4DIPQ5VU43 2346 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PHF20L1A8MW92 1017 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 APBB1O00213 710 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 RAB11FIP3O75154 756 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PLCG2P16885 1265 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PPP4CP60510 307 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 NOL9Q5SY16 702 aaKnown RBP8.45□□□□□ -1.06
SF3B3-209ENST00000567635 C20orf194Q5TEA3 1177 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 CLASRPQ8N2M8 674 aaKnown RBP8.45□□□□□ -1.06
SF3B3-209ENST00000567635 KIF1BPQ96EK5 621 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 ZFYVE28Q9HCC9 887 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 IL1RAPL2Q9NP60 686 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PIH1D3Q9NQM4 214 aaKnown RBP8.45□□□□□ -1.06
SF3B3-209ENST00000567635 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
SF3B3-209ENST00000567635 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
SF3B3-209ENST00000567635 BTBD19C9JJ37 291 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 TBC1D12O60347 775 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 CTNND1O60716 968 aaKnown RBP8.44□□□□□ -1.06
SF3B3-209ENST00000567635 SP3Q02447 781 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-209ENST00000567635 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 SH3RF3Q8TEJ3 882 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-209ENST00000567635 ERO1AQ96HE7 468 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.44□□□□□ -1.06
SF3B3-209ENST00000567635 ZCCHC17Q9NP64 241 aaKnown RBP8.44□□□□□ -1.06
SF3B3-209ENST00000567635 PICK1Q9NRD5 415 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 ATAD5Q96QE3 1844 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 DOCK1Q14185 1865 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 RFX7Q2KHR2 1363 aa8.44□□□□□ -1.06
SF3B3-209ENST00000567635 CXCL11O14625 94 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 IFIT2P09913 472 aaKnown RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 PTPRAP18433 802 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 CYP7A1P22680 504 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 RGS19P49795 217 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 MAP3K12Q12852 859 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 FBXO46Q6PJ61 603 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 TMED8Q6PL24 325 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 SCYL3Q8IZE3 742 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 TGFBRAP1Q8WUH2 860 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 BCL11AQ9H165 835 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
SF3B3-209ENST00000567635 AATFQ9NY61 560 aaKnown RBP eCLIP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms