RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ST5P78524 1137 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 DDR1Q08345 913 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 DNAJC25Q9H1X3 360 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
CMTM3-214ENST00000567572 GOLGA6L19H0YKK7 550 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 CPLX1O14810 134 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 ME1P48163 572 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 ANTXR2P58335 489 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 GLIPR1L2Q4G1C9 344 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 TRIM5Q9C035 493 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 ARMT1Q9H993 441 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 EPB41L4AQ9HCS5 686 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-214ENST00000567572 TIAM2Q8IVF5 1701 aa20.6■□□□□ 0.89
CMTM3-214ENST00000567572 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 APPP05067 770 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 IQCB1Q15051 598 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 ZNF827Q17R98 1081 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 CHST3Q7LGC8 479 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 MRFAP1L1Q96HT8 127 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 GOLPH3LQ9H4A5 285 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 ANGEL1Q9UNK9 670 aaKnown RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 TNS1Q9HBL0 1735 aaKnown RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 GNAT2P19087 354 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 HIBADHP31937 336 aaKnown RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 TBC1D10CQ8IV04 446 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 FSIP1Q8NA03 581 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 LINC00301Q8NCQ3 95 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 TMEM87BQ96K49 555 aa20.59■□□□□ 0.89
CMTM3-214ENST00000567572 NAT10Q9H0A0 1025 aaKnown RBP20.59■□□□□ 0.89
CMTM3-214ENST00000567572 GSG1L2A8MUP6 293 aa20.58■□□□□ 0.88
CMTM3-214ENST00000567572 CEBPZQ03701 1054 aaKnown RBP20.58■□□□□ 0.88
CMTM3-214ENST00000567572 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.88
CMTM3-214ENST00000567572 FMR1NBQ8N0W7 255 aaPredicted RBP20.58■□□□□ 0.88
CMTM3-214ENST00000567572 LCORLQ8N3X6 602 aa20.58■□□□□ 0.88
CMTM3-214ENST00000567572 RPGRQ92834 1020 aaKnown RBP20.58■□□□□ 0.88
CMTM3-214ENST00000567572 ABCF2Q9UG63 623 aa20.58■□□□□ 0.88
CMTM3-214ENST00000567572 NEMFO60524 1076 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 APBA3O96018 575 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 RXRBP28702 533 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 ADGRA1Q86SQ6 560 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 CEP57L1Q8IYX8 460 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 IFNL3Q8IZI9 196 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 SPC24Q8NBT2 197 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 TFCP2L1Q9NZI6 479 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-214ENST00000567572 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 CYP7A1P22680 504 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 CHAF1AQ13111 956 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-214ENST00000567572 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 RAI14Q9P0K7 980 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 PCDHA7Q9UN72 937 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 LEMD3Q9Y2U8 911 aa20.57■□□□□ 0.88
CMTM3-214ENST00000567572 NRXN2Q9P2S2 1712 aa20.56■□□□□ 0.88
CMTM3-214ENST00000567572 SH2B2O14492 632 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-214ENST00000567572 STK38Q15208 465 aa20.56■□□□□ 0.88
CMTM3-214ENST00000567572 TXNRD3Q86VQ6 643 aa20.56■□□□□ 0.88
CMTM3-214ENST00000567572 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.88
CMTM3-214ENST00000567572 XDHP47989 1333 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 KLRG2A4D1S0 409 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-214ENST00000567572 MIGA1Q8NAN2 632 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 BPIFA3Q9BQP9 254 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 NAPBQ9H115 298 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 PYCARDQ9ULZ3 195 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 PRKAB2O43741 272 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 PTGS1P23219 599 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-214ENST00000567572 FOSBP53539 338 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 KIF23Q02241 960 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-214ENST00000567572 SGMS1Q86VZ5 419 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 DRC7Q8IY82 874 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 MPNDQ8N594 471 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 ZNF384Q8TF68 577 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 GPHNQ9NQX3 736 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-214ENST00000567572 ANKIB1Q9P2G1 1089 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 SLC4A4Q9Y6R1 1079 aa20.55■□□□□ 0.88
CMTM3-214ENST00000567572 NID2Q14112 1375 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 CHD4Q14839 1912 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 SPTLC2O15270 562 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 SF3A1Q15459 793 aaKnown RBP20.54■□□□□ 0.88
CMTM3-214ENST00000567572 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 CCDC186Q7Z3E2 898 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
CMTM3-214ENST00000567572 RIOK1Q9BRS2 568 aaKnown RBP20.54■□□□□ 0.88
CMTM3-214ENST00000567572 MTA3Q9BTC8 594 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 CLIP2Q9UDT6 1046 aa20.54■□□□□ 0.88
CMTM3-214ENST00000567572 ANKRD31Q8N7Z5 1873 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 BECN2A8MW95 431 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
CMTM3-214ENST00000567572 C11orf57Q6ZUT1 292 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-214ENST00000567572 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
CMTM3-214ENST00000567572 COL23A1Q86Y22 540 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-214ENST00000567572 NACAP1Q9BZK3 213 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 CNNM2Q9H8M5 875 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 STK36Q9NRP7 1315 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms