RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TBC1D12O60347 775 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 BTDP43251 543 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 MECOMQ03112 1051 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 PICK1Q9NRD5 415 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 RFX7Q2KHR2 1363 aa18.5■□□□□ 0.55
RNF40-209ENST00000566703 PNMA6EA0A0J9YXQ4 647 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 CTNND1O60716 968 aaKnown RBP18.49■□□□□ 0.55
RNF40-209ENST00000566703 UQCRFS1P1P0C7P4 283 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 EN2P19622 333 aaPredicted RBP18.49■□□□□ 0.55
RNF40-209ENST00000566703 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
RNF40-209ENST00000566703 RHBDL3P58872 404 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 GPAT2Q6NUI2 795 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 CPA4Q9UI42 421 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.49■□□□□ 0.55
RNF40-209ENST00000566703 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
RNF40-209ENST00000566703 DDTLA6NHG4 134 aaPredicted RBP18.48■□□□□ 0.55
RNF40-209ENST00000566703 PTPRAP18433 802 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 PARK7Q99497 189 aaKnown RBP18.48■□□□□ 0.55
RNF40-209ENST00000566703 ARHGAP39Q9C0H5 1083 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 DDX4Q9NQI0 724 aaKnown RBP18.48■□□□□ 0.55
RNF40-209ENST00000566703 SLC45A1Q9Y2W3 748 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 ADGRA2Q96PE1 1338 aa18.48■□□□□ 0.55
RNF40-209ENST00000566703 A0A0G2JLL6 359 aaPredicted RBP18.47■□□□□ 0.55
RNF40-209ENST00000566703 IGSF3O75054 1194 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 PSMC4P43686 418 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 PRRT2Q7Z6L0 340 aaPredicted RBP18.47■□□□□ 0.55
RNF40-209ENST00000566703 ZNF384Q8TF68 577 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
RNF40-209ENST00000566703 PCDH10Q9P2E7 1040 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 SRRDQ9UH36 339 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
RNF40-209ENST00000566703 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
RNF40-209ENST00000566703 PICALMQ13492 652 aa18.46■□□□□ 0.55
RNF40-209ENST00000566703 POLA2Q14181 598 aa18.46■□□□□ 0.55
RNF40-209ENST00000566703 TMEM57Q8N5G2 664 aa18.46■□□□□ 0.55
RNF40-209ENST00000566703 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
RNF40-209ENST00000566703 BCRP11274 1271 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 TRIM47Q96LD4 638 aa18.45■□□□□ 0.54
RNF40-209ENST00000566703 OSBPP22059 807 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 CTGFP29279 349 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 MCAMP43121 646 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 SH3TC2Q8TF17 1288 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
RNF40-209ENST00000566703 RAI14Q9P0K7 980 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
RNF40-209ENST00000566703 TNRC18O15417 2968 aaPredicted RBP18.44■□□□□ 0.54
RNF40-209ENST00000566703 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
RNF40-209ENST00000566703 FCGRTP55899 365 aa18.43■□□□□ 0.54
RNF40-209ENST00000566703 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
RNF40-209ENST00000566703 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
RNF40-209ENST00000566703 RAET1EQ8TD07 263 aa18.43■□□□□ 0.54
RNF40-209ENST00000566703 ZNF512BQ96KM6 892 aaPredicted RBP18.43■□□□□ 0.54
RNF40-209ENST00000566703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.43■□□□□ 0.54
RNF40-209ENST00000566703 COL2A1P02458 1487 aaPredicted RBP18.43■□□□□ 0.54
RNF40-209ENST00000566703 BAG3O95817 575 aa18.42■□□□□ 0.54
RNF40-209ENST00000566703 CYP2C8P10632 490 aa18.42■□□□□ 0.54
RNF40-209ENST00000566703 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
RNF40-209ENST00000566703 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
RNF40-209ENST00000566703 NOL10Q9BSC4 688 aaKnown RBP18.42■□□□□ 0.54
RNF40-209ENST00000566703 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
RNF40-209ENST00000566703 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
RNF40-209ENST00000566703 KIAA0100Q14667 2235 aaKnown RBP18.41■□□□□ 0.54
RNF40-209ENST00000566703 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
RNF40-209ENST00000566703 PLCG2P16885 1265 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 GRK4P32298 578 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 PPP4CP60510 307 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
RNF40-209ENST00000566703 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
RNF40-209ENST00000566703 MYPNQ86TC9 1320 aa18.41■□□□□ 0.54
RNF40-209ENST00000566703 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
RNF40-209ENST00000566703 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 CAP2P40123 477 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 OS9Q13438 667 aaPredicted RBP18.4■□□□□ 0.54
RNF40-209ENST00000566703 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 DBNDD2Q9BQY9 259 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 AGTPBP1Q9UPW5 1226 aa18.4■□□□□ 0.54
RNF40-209ENST00000566703 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
RNF40-209ENST00000566703 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
RNF40-209ENST00000566703 NAA16Q6N069 864 aaPredicted RBP18.39■□□□□ 0.53
RNF40-209ENST00000566703 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
RNF40-209ENST00000566703 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
RNF40-209ENST00000566703 DOCK2Q92608 1830 aa18.38■□□□□ 0.53
RNF40-209ENST00000566703 ECM2O94769 699 aaPredicted RBP18.38■□□□□ 0.53
RNF40-209ENST00000566703 GJB1P08034 283 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms