RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CDAN1Q8IWY9 1227 aa31.54■■■□□ 2.64
NME3-209ENST00000566600 DNAJC5GQ8N7S2 189 aa31.54■■■□□ 2.64
NME3-209ENST00000566600 RIOK1Q9BRS2 568 aaKnown RBP31.54■■■□□ 2.64
NME3-209ENST00000566600 ANGEL1Q9UNK9 670 aaKnown RBP31.54■■■□□ 2.64
NME3-209ENST00000566600 COL2A1P02458 1487 aaPredicted RBP31.53■■■□□ 2.64
NME3-209ENST00000566600 IREB2P48200 963 aaKnown RBP31.53■■■□□ 2.64
NME3-209ENST00000566600 TICAM2Q86XR7 235 aa31.53■■■□□ 2.64
NME3-209ENST00000566600 ZFPM1Q8IX07 1006 aa31.53■■■□□ 2.64
NME3-209ENST00000566600 TGFBRAP1Q8WUH2 860 aa31.53■■■□□ 2.64
NME3-209ENST00000566600 KLRG1Q96E93 195 aa31.53■■■□□ 2.64
NME3-209ENST00000566600 AK9Q5TCS8 1911 aa31.52■■■□□ 2.64
NME3-209ENST00000566600 UNCXA6NJT0 531 aa31.52■■■□□ 2.64
NME3-209ENST00000566600 ECE1P42892 770 aa31.52■■■□□ 2.64
NME3-209ENST00000566600 PAXIP1Q6ZW49 1069 aaPredicted RBP31.52■■■□□ 2.64
NME3-209ENST00000566600 CSRNP1Q96S65 589 aa31.52■■■□□ 2.64
NME3-209ENST00000566600 CRNKL1Q9BZJ0 848 aaKnown RBP31.52■■■□□ 2.64
NME3-209ENST00000566600 OSBPL5Q9H0X9 879 aaPredicted RBP31.52■■■□□ 2.64
NME3-209ENST00000566600 UBE2Q2LH0YL09 131 aa31.51■■■□□ 2.63
NME3-209ENST00000566600 PDE4AP27815 886 aa31.51■■■□□ 2.63
NME3-209ENST00000566600 RGMBQ6NW40 437 aa31.51■■■□□ 2.63
NME3-209ENST00000566600 MOB2Q70IA6 237 aa31.51■■■□□ 2.63
NME3-209ENST00000566600 ATRNL1Q5VV63 1379 aa31.51■■■□□ 2.63
NME3-209ENST00000566600 USP2O75604 605 aaPredicted RBP31.5■■■□□ 2.63
NME3-209ENST00000566600 USP5P45974 858 aa31.5■■■□□ 2.63
NME3-209ENST00000566600 DHX36Q9H2U1 1008 aaKnown RBP31.5■■■□□ 2.63
NME3-209ENST00000566600 FLT1P17948 1338 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 FOCADQ5VW36 1801 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 TRIM6-TRIM34B2RNG4 842 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 LDLRAD1Q5T700 205 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 MAPKAPK5Q8IW41 473 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 APPBP2Q92624 585 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 AIDAQ96BJ3 306 aa31.49■■■□□ 2.63
NME3-209ENST00000566600 CDK5RAP2Q96SN8 1893 aa31.48■■■□□ 2.63
NME3-209ENST00000566600 MBD4O95243 580 aa31.48■■■□□ 2.63
NME3-209ENST00000566600 ZNF157P51786 506 aaPredicted RBP31.48■■■□□ 2.63
NME3-209ENST00000566600 SH3BP5LQ7L8J4 393 aa31.48■■■□□ 2.63
NME3-209ENST00000566600 CCDC102AQ96A19 550 aa31.48■■■□□ 2.63
NME3-209ENST00000566600 DDTLA6NHG4 134 aaPredicted RBP31.47■■■□□ 2.63
NME3-209ENST00000566600 VEGFBP49765 207 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 SLFNL1Q499Z3 407 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 ANKRD13AQ8IZ07 590 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 LCORLQ8N3X6 602 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 CAPNS2Q96L46 248 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 ZNF341Q9BYN7 854 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 ARMT1Q9H993 441 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 FZD1Q9UP38 647 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 CEP350Q5VT06 3117 aa31.47■■■□□ 2.63
NME3-209ENST00000566600 CHGBP05060 677 aa31.46■■■□□ 2.63
NME3-209ENST00000566600 CYP4F22Q6NT55 531 aa31.46■■■□□ 2.63
NME3-209ENST00000566600 PUS7LQ9H0K6 701 aaKnown RBP31.46■■■□□ 2.63
NME3-209ENST00000566600 WDR33Q9C0J8 1336 aaKnown RBP31.46■■■□□ 2.63
NME3-209ENST00000566600 MIGA2Q7L4E1 593 aa31.45■■■□□ 2.63
NME3-209ENST00000566600 RILPL2Q969X0 211 aa31.45■■■□□ 2.63
NME3-209ENST00000566600 PPP4R2Q9NY27 417 aa31.45■■■□□ 2.63
NME3-209ENST00000566600 MAP3K9P80192 1104 aa31.44■■■□□ 2.62
NME3-209ENST00000566600 PI4KBQ9UBF8 816 aa31.44■■■□□ 2.62
NME3-209ENST00000566600 MAP3K10Q02779 954 aa31.43■■■□□ 2.62
NME3-209ENST00000566600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.43■■■□□ 2.622e-7■■■■□ 21.2
NME3-209ENST00000566600 OSBP2Q969R2 916 aa31.43■■■□□ 2.62
NME3-209ENST00000566600 TBC1D12O60347 775 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 HLA-DOAP06340 250 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 GRM1Q13255 1194 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 ZMYM1Q5SVZ6 1142 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 TTC22Q5TAA0 569 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 SLC10A4Q96EP9 437 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 DDRGK1Q96HY6 314 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 WRNIP1Q96S55 665 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 ATP8A2Q9NTI2 1148 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 CSADQ9Y600 493 aa31.42■■■□□ 2.62
NME3-209ENST00000566600 SLC10A3P09131 477 aa31.41■■■□□ 2.62
NME3-209ENST00000566600 NOGQ13253 232 aa31.41■■■□□ 2.62
NME3-209ENST00000566600 SAP30BPQ9UHR5 308 aaKnown RBP31.41■■■□□ 2.62
NME3-209ENST00000566600 HERC5Q9UII4 1024 aaKnown RBP31.41■■■□□ 2.62
NME3-209ENST00000566600 ZNF112Q9UJU3 913 aa31.41■■■□□ 2.62
NME3-209ENST00000566600 PALD1Q9ULE6 856 aa31.41■■■□□ 2.62
NME3-209ENST00000566600 TTC6Q86TZ1 520 aa31.4■■■□□ 2.62
NME3-209ENST00000566600 RASAL3Q86YV0 1011 aa31.4■■■□□ 2.62
NME3-209ENST00000566600 FOXP4Q8IVH2 680 aaPredicted RBP31.4■■■□□ 2.62
NME3-209ENST00000566600 STRBPQ96SI9 672 aaKnown RBP31.4■■■□□ 2.62
NME3-209ENST00000566600 SLC4A4Q9Y6R1 1079 aa31.4■■■□□ 2.62
NME3-209ENST00000566600 GNAT2P19087 354 aa31.39■■■□□ 2.62
NME3-209ENST00000566600 MAP2K2P36507 400 aa31.39■■■□□ 2.62
NME3-209ENST00000566600 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.39■■■□□ 2.62
NME3-209ENST00000566600 SDR42E1Q8WUS8 393 aa31.39■■■□□ 2.62
NME3-209ENST00000566600 DCP1AQ9NPI6 582 aaPredicted RBP31.39■■■□□ 2.62
NME3-209ENST00000566600 MYH1P12882 1939 aa31.39■■■□□ 2.62
NME3-209ENST00000566600 FAM155AB1AL88 458 aaPredicted RBP31.38■■■□□ 2.61
NME3-209ENST00000566600 GPAA1O43292 621 aa31.38■■■□□ 2.61
NME3-209ENST00000566600 CLMNQ96JQ2 1002 aa31.38■■■□□ 2.61
NME3-209ENST00000566600 TRIM34Q9BYJ4 488 aa31.38■■■□□ 2.61
NME3-209ENST00000566600 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.38■■■□□ 2.61
NME3-209ENST00000566600 HELLSQ9NRZ9 838 aa31.38■■■□□ 2.61
NME3-209ENST00000566600 M0R2C6 588 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 HIP1O00291 1037 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 PRKAB2O43741 272 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 VGLL4Q14135 290 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 CRACR2BQ8N4Y2 399 aaPredicted RBP31.37■■■□□ 2.61
NME3-209ENST00000566600 JMYQ8N9B5 988 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 MCM9Q9NXL9 1143 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 NAV1Q8NEY1 1877 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms