RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
LINC00562-201ENST00000566385 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 WDR19Q8NEZ3 1342 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 FOSBP53539 338 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
LINC00562-201ENST00000566385 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 C21orf2O43822 256 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
LINC00562-201ENST00000566385 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
LINC00562-201ENST00000566385 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 APOA5Q6Q788 366 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 KRT23Q9C075 422 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
LINC00562-201ENST00000566385 KCNA3P22001 575 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 BTDP43251 543 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 GSE1Q14687 1217 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 TMX4Q9H1E5 349 aaPredicted RBP13.34□□□□□ -0.27
LINC00562-201ENST00000566385 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 CDK5RAP2Q96SN8 1893 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
LINC00562-201ENST00000566385 CDC27P30260 824 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 GIMAP6Q6P9H5 292 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
LINC00562-201ENST00000566385 GOLGA6L22H0YM25 854 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 USP5P45974 858 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 PPP4CP60510 307 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 CNPY2Q9Y2B0 182 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 C10orf71Q711Q0 1435 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 SNED1Q8TER0 1413 aa13.33□□□□□ -0.28
LINC00562-201ENST00000566385 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 SCNN1DP51172 638 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 GSTO1P78417 241 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 AOC3Q16853 763 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 LLPHQ9BRT6 129 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 G3V3G9 751 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 NMT2O60551 498 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 BAG3O95817 575 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 PLCD1P51178 756 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 RHBDL3P58872 404 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
LINC00562-201ENST00000566385 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
LINC00562-201ENST00000566385 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 LDHCP07864 332 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 FGRP09769 529 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 DPEP1P16444 411 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 LIFRP42702 1097 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 LAMB1P07942 1786 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
LINC00562-201ENST00000566385 PDCP20941 246 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00562-201ENST00000566385 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 SLC16A10Q8TF71 515 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 ESR2Q92731 530 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 EYA3Q99504 573 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
LINC00562-201ENST00000566385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00562-201ENST00000566385 PCDHAC2Q9Y5I4 1007 aa13.31□□□□□ -0.28
LINC00562-201ENST00000566385 TNKSO95271 1327 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 ECE2O60344 883 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 SEC23AQ15436 765 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 C12orf60Q5U649 245 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
LINC00562-201ENST00000566385 USP48Q86UV5 1035 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 PHKBQ93100 1093 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
LINC00562-201ENST00000566385 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
LINC00562-201ENST00000566385 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 GAKO14976 1311 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 ZBTB43O43298 467 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 WTAPQ15007 396 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 PODNQ7Z5L7 613 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms