RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZC3H12CQ9C0D7 883 aaKnown RBP4.96□□□□□ -1.62
SMG1-212ENST00000566328 TUT1Q9H6E5 874 aaKnown RBP4.96□□□□□ -1.62
SMG1-212ENST00000566328 DISC1Q9NRI5 854 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 ZNF862O60290 1169 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 HCLS1P14317 486 aaPredicted RBP4.95□□□□□ -1.62
SMG1-212ENST00000566328 ZNF157P51786 506 aaPredicted RBP4.95□□□□□ -1.62
SMG1-212ENST00000566328 OXCT1P55809 520 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 TTLL4Q14679 1199 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.95□□□□□ -1.62
SMG1-212ENST00000566328 CCDC82Q8N4S0 544 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 LRRN4CLQ8ND94 238 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 TMC1Q8TDI8 760 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 ASB11Q8WXH4 323 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 FAM129BQ96TA1 746 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 TMEM39AQ9NV64 488 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 ADAMTS6Q9UKP5 1117 aa4.95□□□□□ -1.62
SMG1-212ENST00000566328 LRRC10BA6NIK2 292 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 EIF1AYO14602 144 aaKnown RBP4.94□□□□□ -1.62
SMG1-212ENST00000566328 XRCC5P13010 732 aaKnown RBP4.94□□□□□ -1.62
SMG1-212ENST00000566328 DTHD1Q6ZMT9 781 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 FLAD1Q8NFF5 587 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 KCNB2Q92953 911 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 GTF2IRD1Q9UHL9 959 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 PCDHGC5Q9Y5F6 944 aa4.94□□□□□ -1.62
SMG1-212ENST00000566328 LEFTY1O75610 366 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 CD96P40200 585 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 ERVK-24P63145 666 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 ARHGAP4P98171 946 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 FAAP100Q0VG06 881 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 SPOCD1Q6ZMY3 1216 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 ZSWIM9Q86XI8 627 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 RNF214Q8ND24 703 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 EMILIN2Q9BXX0 1053 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 TNKS2Q9H2K2 1166 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 NLRP2Q9NX02 1062 aa4.93□□□□□ -1.62
SMG1-212ENST00000566328 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
SMG1-212ENST00000566328 IGF2BP3O00425 579 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMG1-212ENST00000566328 ITIH2P19823 946 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 GRM2Q14416 872 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 KCNMB1Q16558 191 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 ZC3H12AQ5D1E8 599 aaKnown RBP4.92□□□□□ -1.62
SMG1-212ENST00000566328 TOP6BLQ8N6T0 577 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 DMRTB1Q96MA1 342 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 PPP1R16BQ96T49 567 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 PLAGL2Q9UPG8 496 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 USTQ9Y2C2 406 aa4.92□□□□□ -1.62
SMG1-212ENST00000566328 AFMP43652 599 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 RAP1GAPP47736 663 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 FCGRTP55899 365 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 ZP2Q05996 745 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 MESP2Q0VG99 397 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 IKZF1Q13422 519 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 ECM1Q16610 540 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 PDZD3Q86UT5 571 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 SULF2Q8IWU5 870 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 ISL2Q96A47 359 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 TOX2Q96NM4 488 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 CSRNP1Q96S65 589 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 NIF3L1Q9GZT8 377 aa4.91□□□□□ -1.62
SMG1-212ENST00000566328 GNAT3A8MTJ3 354 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 NEFMP07197 916 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 ARNTP27540 789 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 SERPINB4P48594 390 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 EPS8L3Q8TE67 593 aaKnown RBP4.9□□□□□ -1.63
SMG1-212ENST00000566328 ALKBH8Q96BT7 664 aaKnown RBP4.9□□□□□ -1.63
SMG1-212ENST00000566328 ACSBG1Q96GR2 724 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 PICK1Q9NRD5 415 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 SAMM50Q9Y512 469 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 U3KQE9 123 aa4.9□□□□□ -1.63
SMG1-212ENST00000566328 CARNS1A5YM72 827 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 NME2P22392 152 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 CLCN7P51798 805 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 MLANAQ16655 118 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 MAP1SQ66K74 1059 aaPredicted RBP4.89□□□□□ -1.63
SMG1-212ENST00000566328 KCT2Q8NC54 265 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 ZSCAN18Q8TBC5 510 aaPredicted RBP4.89□□□□□ -1.63
SMG1-212ENST00000566328 HEXIM2Q96MH2 286 aaKnown RBP4.89□□□□□ -1.63
SMG1-212ENST00000566328 PRDM10Q9NQV6 1147 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 LMCD1Q9NZU5 365 aa4.89□□□□□ -1.63
SMG1-212ENST00000566328 GPR182O15218 404 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 TSPAN15O95858 294 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 CDC37L1Q7L3B6 337 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 ANKLE2Q86XL3 938 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 CCER1Q8TC90 406 aaPredicted RBP4.88□□□□□ -1.63
SMG1-212ENST00000566328 CBX8Q9HC52 389 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 PRDM7Q9NQW5 492 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 CTNND2Q9UQB3 1225 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 AKAP2Q9Y2D5 859 aa4.88□□□□□ -1.63
SMG1-212ENST00000566328 ZNF503-AS2A6NEH8 195 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 FANCGO15287 622 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 IGHA2P01877 340 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 MPZL3Q6UWV2 235 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 FAM214BQ7L5A3 538 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 GPBAR1Q8TDU6 330 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 CCDC120Q96HB5 630 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 RBCK1Q9BYM8 510 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 BCO2Q9BYV7 579 aa4.87□□□□□ -1.63
SMG1-212ENST00000566328 FOXQ1Q9C009 403 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms