RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 SOX10P56693 466 aa24.45■■□□□ 1.5
CLN6-206ENST00000565471 NSUN4Q96CB9 384 aaKnown RBP24.45■■□□□ 1.5
CLN6-206ENST00000565471 NPM3O75607 178 aaKnown RBP24.44■■□□□ 1.5
CLN6-206ENST00000565471 TBC1D9Q6ZT07 1266 aa24.44■■□□□ 1.5
CLN6-206ENST00000565471 RHBDL3P58872 404 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 MAP3K10Q02779 954 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 CCDC158Q5M9N0 1113 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 CD99L2Q8TCZ2 262 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 DDX4Q9NQI0 724 aaKnown RBP24.43■■□□□ 1.5
CLN6-206ENST00000565471 RAI14Q9P0K7 980 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 KCNH4Q9UQ05 1017 aa24.43■■□□□ 1.5
CLN6-206ENST00000565471 BTBD19C9JJ37 291 aa24.42■■□□□ 1.5
CLN6-206ENST00000565471 MS4A1P11836 297 aa24.42■■□□□ 1.5
CLN6-206ENST00000565471 TTC39AQ5SRH9 613 aa24.42■■□□□ 1.5
CLN6-206ENST00000565471 SH3BP5LQ7L8J4 393 aa24.42■■□□□ 1.5
CLN6-206ENST00000565471 ZSCAN29Q8IWY8 852 aaPredicted RBP24.42■■□□□ 1.5
CLN6-206ENST00000565471 ZNF512BQ96KM6 892 aaPredicted RBP24.42■■□□□ 1.5
CLN6-206ENST00000565471 DBNDD2Q9BQY9 259 aa24.42■■□□□ 1.5
CLN6-206ENST00000565471 PHF20L1A8MW92 1017 aa24.41■■□□□ 1.5
CLN6-206ENST00000565471 CEP85Q6P2H3 762 aa24.41■■□□□ 1.5
CLN6-206ENST00000565471 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.41■■□□□ 1.5
CLN6-206ENST00000565471 PANK1Q8TE04 598 aa24.41■■□□□ 1.5
CLN6-206ENST00000565471 EFCC1Q9HA90 598 aa24.41■■□□□ 1.5
CLN6-206ENST00000565471 LRP2BPQ9P2M1 347 aa24.41■■□□□ 1.5
CLN6-206ENST00000565471 MAST2Q6P0Q8 1798 aa24.4■■□□□ 1.5
CLN6-206ENST00000565471 DDTLA6NHG4 134 aaPredicted RBP24.4■■□□□ 1.5
CLN6-206ENST00000565471 IGSF3O75054 1194 aa24.4■■□□□ 1.5
CLN6-206ENST00000565471 PICALMQ13492 652 aa24.4■■□□□ 1.5
CLN6-206ENST00000565471 SCYL3Q8IZE3 742 aa24.4■■□□□ 1.5
CLN6-206ENST00000565471 PTPN22Q9Y2R2 807 aa24.4■■□□□ 1.5
CLN6-206ENST00000565471 COL2A1P02458 1487 aaPredicted RBP24.39■■□□□ 1.5
CLN6-206ENST00000565471 TLR2O60603 784 aa24.39■■□□□ 1.49
CLN6-206ENST00000565471 ARHGEF6Q15052 776 aa24.39■■□□□ 1.49
CLN6-206ENST00000565471 ANKRD23Q86SG2 305 aa24.39■■□□□ 1.49
CLN6-206ENST00000565471 SNRKQ9NRH2 765 aa24.38■■□□□ 1.49
CLN6-206ENST00000565471 DBNLQ9UJU6 430 aaKnown RBP24.38■■□□□ 1.49
CLN6-206ENST00000565471 CXCL11O14625 94 aa24.37■■□□□ 1.49
CLN6-206ENST00000565471 TBC1D12O60347 775 aa24.37■■□□□ 1.49
CLN6-206ENST00000565471 CAP1Q01518 475 aa24.37■■□□□ 1.49
CLN6-206ENST00000565471 PICK1Q9NRD5 415 aa24.37■■□□□ 1.49
CLN6-206ENST00000565471 CTNND1O60716 968 aaKnown RBP24.36■■□□□ 1.49
CLN6-206ENST00000565471 MOGSQ13724 837 aa24.36■■□□□ 1.49
CLN6-206ENST00000565471 ERC1Q8IUD2 1116 aa24.36■■□□□ 1.49
CLN6-206ENST00000565471 EAF2Q96CJ1 260 aaPredicted RBP24.36■■□□□ 1.49
CLN6-206ENST00000565471 NOL10Q9BSC4 688 aaKnown RBP24.36■■□□□ 1.49
CLN6-206ENST00000565471 DOCK1Q14185 1865 aa24.35■■□□□ 1.49
CLN6-206ENST00000565471 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
CLN6-206ENST00000565471 PTPRAP18433 802 aa24.35■■□□□ 1.49
CLN6-206ENST00000565471 NAA16Q6N069 864 aaPredicted RBP24.35■■□□□ 1.49
CLN6-206ENST00000565471 OSBPL5Q9H0X9 879 aaPredicted RBP24.35■■□□□ 1.49
CLN6-206ENST00000565471 PDHXO00330 501 aa24.34■■□□□ 1.49
CLN6-206ENST00000565471 BAG3O95817 575 aa24.34■■□□□ 1.49
CLN6-206ENST00000565471 TEX11Q8IYF3 940 aa24.34■■□□□ 1.49
CLN6-206ENST00000565471 TLR7Q9NYK1 1049 aaKnown RBP24.34■■□□□ 1.49
CLN6-206ENST00000565471 PLCG2P16885 1265 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 ZAP70P43403 619 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 PPP4CP60510 307 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 HSP90AB4PQ58FF6 505 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 ARMC5Q96C12 935 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 CCDC8Q9H0W5 538 aaPredicted RBP24.33■■□□□ 1.49
CLN6-206ENST00000565471 DDX19BQ9UMR2 479 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 EXOC6BQ9Y2D4 811 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 ZHX2Q9Y6X8 837 aa24.33■■□□□ 1.49
CLN6-206ENST00000565471 A0A0G2JLL6 359 aaPredicted RBP24.32■■□□□ 1.48
CLN6-206ENST00000565471 SLURP2P0DP57 97 aa24.32■■□□□ 1.48
CLN6-206ENST00000565471 LACTBP83111 547 aaPredicted RBP24.32■■□□□ 1.48
CLN6-206ENST00000565471 KIF22Q14807 665 aa24.32■■□□□ 1.48
CLN6-206ENST00000565471 C17orf99Q6UX52 265 aa24.32■■□□□ 1.48
CLN6-206ENST00000565471 PRRT2Q7Z6L0 340 aaPredicted RBP24.32■■□□□ 1.48
CLN6-206ENST00000565471 SH3RF3Q8TEJ3 882 aaPredicted RBP24.32■■□□□ 1.48
CLN6-206ENST00000565471 AFG3L2Q9Y4W6 797 aa24.32■■□□□ 1.48
CLN6-206ENST00000565471 ADGRA2Q96PE1 1338 aa24.32■■□□□ 1.48
CLN6-206ENST00000565471 GNRH1P01148 92 aa24.31■■□□□ 1.48
CLN6-206ENST00000565471 FASTKD5Q7L8L6 764 aaKnown RBP24.31■■□□□ 1.48
CLN6-206ENST00000565471 RPAP2Q8IXW5 612 aaPredicted RBP24.31■■□□□ 1.48
CLN6-206ENST00000565471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLN6-206ENST00000565471 PIH1D3Q9NQM4 214 aaKnown RBP24.31■■□□□ 1.48
CLN6-206ENST00000565471 AATFQ9NY61 560 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLN6-206ENST00000565471 PHIPQ8WWQ0 1821 aa24.31■■□□□ 1.48
CLN6-206ENST00000565471 GPAT2Q6NUI2 795 aa24.3■■□□□ 1.48
CLN6-206ENST00000565471 PARK7Q99497 189 aaKnown RBP24.3■■□□□ 1.48
CLN6-206ENST00000565471 DHX36Q9H2U1 1008 aaKnown RBP24.3■■□□□ 1.48
CLN6-206ENST00000565471 RCAN3Q9UKA8 241 aa24.3■■□□□ 1.48
CLN6-206ENST00000565471 MYO5AQ9Y4I1 1855 aaKnown RBP24.3■■□□□ 1.48
CLN6-206ENST00000565471 ADGRA1Q86SQ6 560 aa24.29■■□□□ 1.48
CLN6-206ENST00000565471 AACSQ86V21 672 aa24.29■■□□□ 1.48
CLN6-206ENST00000565471 CHMP4BQ9H444 224 aaKnown RBP24.29■■□□□ 1.48
CLN6-206ENST00000565471 ZBTB40Q9NUA8 1239 aa24.29■■□□□ 1.48
CLN6-206ENST00000565471 HERC5Q9UII4 1024 aaKnown RBP24.29■■□□□ 1.48
CLN6-206ENST00000565471 COG6Q9Y2V7 657 aa24.29■■□□□ 1.48
CLN6-206ENST00000565471 PTPRFP10586 1907 aa24.29■■□□□ 1.48
CLN6-206ENST00000565471 HTTP42858 3142 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 HMMRO75330 724 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 ARHGAP39Q9C0H5 1083 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 CPA4Q9UI42 421 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 SLC45A1Q9Y2W3 748 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 PTCH2Q9Y6C5 1203 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 RBBP6Q7Z6E9 1792 aaKnown RBP24.28■■□□□ 1.48
CLN6-206ENST00000565471 FOCADQ5VW36 1801 aa24.28■■□□□ 1.48
CLN6-206ENST00000565471 ZSWIM8A7E2V4 1837 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms