RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 A6NJY4 79 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 KIF20AO95235 890 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 VDRP11473 427 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 PEX19P40855 299 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 CD151P48509 253 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 DMTNQ08495 405 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 C1orf131Q8NDD1 294 aaKnown RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 POM121Q96HA1 1249 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 MYCBPQ99417 103 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 INO80BQ9C086 356 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 TMX4Q9H1E5 349 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 RANBP17Q9H2T7 1088 aaKnown RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 ANAPC4Q9UJX5 808 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 ISY1Q9ULR0 285 aaKnown RBP6.18□□□□□ -1.42
CAPN3-214ENST00000565274 DIP2BQ9P265 1576 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 ANKRD26Q9UPS8 1709 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 CCDC189A1A4V9 331 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 GOLGA6L3A6NEY3 463 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 TMEM229AB2RXF0 380 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ITGB7P26010 798 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ZC3H6P61129 1189 aaKnown RBP6.17□□□□□ -1.42
CAPN3-214ENST00000565274 LMOD3Q0VAK6 560 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 MCM6Q14566 821 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 PTPROQ16827 1216 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 MAP7D1Q3KQU3 841 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 NAALADL2Q58DX5 795 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 FAM182BQ5T319 152 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 EGFLAMQ63HQ2 1017 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ATF7IPQ6VMQ6 1270 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 HDGFL2Q7Z4V5 671 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-214ENST00000565274 PCGF5Q86SE9 256 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ENOX1Q8TC92 643 aaKnown RBP6.17□□□□□ -1.42
CAPN3-214ENST00000565274 KCNB2Q92953 911 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ZBTB40Q9NUA8 1239 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 KIF16BQ96L93 1317 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 ALKQ9UM73 1620 aa6.17□□□□□ -1.42
CAPN3-214ENST00000565274 CPSF1Q10570 1443 aaKnown RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 SPATA31D1Q6ZQQ2 1576 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 CDK2AP1O14519 115 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 DIAPH1O60610 1272 aaKnown RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 RAPGEF3O95398 923 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 ZNF853P0CG23 659 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 FAM157BP0CG42 384 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 NAT1P18440 290 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 ALAS2P22557 587 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 MCM4P33991 863 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 TXLNAP40222 546 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 IGBP1P78318 339 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 TBC1D10BQ4KMP7 808 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 ZNF468Q5VIY5 522 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 RSPH1Q8WYR4 309 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 SPACA7Q96KW9 195 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 RSPH9Q9H1X1 276 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 SLKQ9H2G2 1235 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 AVENQ9NQS1 362 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 ZDHHC3Q9NYG2 299 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 CHMP5Q9NZZ3 219 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-214ENST00000565274 PREX1Q8TCU6 1659 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 TECPR2O15040 1411 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 FAM135BQ49AJ0 1406 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 YEATS2Q9ULM3 1422 aa6.16□□□□□ -1.42
CAPN3-214ENST00000565274 BICDL2A1A5D9 508 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 CARNS1A5YM72 827 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 PIK3CDO00329 1044 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 TGFB3P10600 412 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 TRIM27P14373 513 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 ZNF16P17020 682 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 FLT3P36888 993 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 MRE11P49959 708 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 LRRC69Q6ZNQ3 347 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 EP400NLQ6ZTU2 488 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 SYT9Q86SS6 491 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 ZNF295-AS1Q8N0V1 137 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 SNX21Q969T3 373 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 SLC4A9Q96Q91 983 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 PAIP2Q9BPZ3 127 aaKnown RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 CCDC94Q9BW85 323 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 NEUROD4Q9HD90 331 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 POLKQ9UBT6 870 aa6.15□□□□□ -1.42
CAPN3-214ENST00000565274 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
CAPN3-214ENST00000565274 A2ML1A8K2U0 1454 aa6.15□□□□□ -1.43
CAPN3-214ENST00000565274 hCG_2014768A0A024R1R8 64 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ELOA3CA0A087WX78 387 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 SCO2A0A1W2PP80 73 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ELOA3DA6NLF2 546 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 APBA3O96018 575 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms