RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FKBP1AP62942 108 aaKnown RBP13.27□□□□□ -0.29
SF3B3-205ENST00000564899 PTH1RQ03431 593 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 C2orf69Q8N8R5 385 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 ZNF384Q8TF68 577 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 DPF2Q92785 391 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 CDCA5Q96FF9 252 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 SZT2Q5T011 3432 aa13.27□□□□□ -0.29
SF3B3-205ENST00000564899 MAGEB6P1A0A0J9YX57 407 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 LDHCP07864 332 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 MYH7P12883 1935 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 ARMT1Q9H993 441 aa13.26□□□□□ -0.29
SF3B3-205ENST00000564899 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 LCORLQ8N3X6 602 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 MAP4K1Q92918 833 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 CCDC102AQ96A19 550 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 DCPSQ96C86 337 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 DSCC1Q9BVC3 393 aa13.25□□□□□ -0.29
SF3B3-205ENST00000564899 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 RBM8AQ9Y5S9 174 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
SF3B3-205ENST00000564899 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
SF3B3-205ENST00000564899 HSPD1P10809 573 aaKnown RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 GNAT2P19087 354 aa13.24□□□□□ -0.29
SF3B3-205ENST00000564899 ANGEL2Q5VTE6 544 aaKnown RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
SF3B3-205ENST00000564899 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 NOL10Q9BSC4 688 aaKnown RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
SF3B3-205ENST00000564899 AATFQ9NY61 560 aaKnown RBP eCLIP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-205ENST00000564899 GAKO14976 1311 aa13.23□□□□□ -0.29
SF3B3-205ENST00000564899 BAG3O95817 575 aa13.23□□□□□ -0.29
SF3B3-205ENST00000564899 VIL1P09327 827 aaKnown RBP13.23□□□□□ -0.29
SF3B3-205ENST00000564899 HSPA4P34932 840 aa13.23□□□□□ -0.29
SF3B3-205ENST00000564899 DYNLL1P63167 89 aaKnown RBP13.23□□□□□ -0.29
SF3B3-205ENST00000564899 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
SF3B3-205ENST00000564899 SLC4A4Q9Y6R1 1079 aa13.23□□□□□ -0.29
SF3B3-205ENST00000564899 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 FOXP2O15409 715 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 APPP05067 770 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 BTDP43251 543 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-205ENST00000564899 DAGLAQ9Y4D2 1042 aa13.22□□□□□ -0.29
SF3B3-205ENST00000564899 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
SF3B3-205ENST00000564899 UBE2Q2LH0YL09 131 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 SLC27A2O14975 620 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 PRKAB2O43741 272 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 RPS12P25398 132 aaKnown RBP13.21□□□□□ -0.29
SF3B3-205ENST00000564899 CRKP46108 304 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 PPP4CP60510 307 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.29
SF3B3-205ENST00000564899 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
SF3B3-205ENST00000564899 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 TEKT1Q969V4 418 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
SF3B3-205ENST00000564899 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
SF3B3-205ENST00000564899 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 PSME4Q14997 1843 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 PLCG2P16885 1265 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 ANAPC15P60006 121 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 AGBL3Q8NEM8 1001 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 GMLQ99445 158 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 MRIQ9BWK5 157 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 NAPBQ9H115 298 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 HDAC9Q9UKV0 1011 aa13.2□□□□□ -0.3
SF3B3-205ENST00000564899 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
SF3B3-205ENST00000564899 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 FGAP02671 866 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
SF3B3-205ENST00000564899 TDO2P48775 406 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms