RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TMEM51Q9NW97 253 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 HYPKQ9NX55 129 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 LRP2BPQ9P2M1 347 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 KIF28PB7ZC32 967 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 NAP1L1P55209 391 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 ZYXQ15942 572 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 AMOTQ4VCS5 1084 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 INTS5Q6P9B9 1019 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 FNBP4Q8N3X1 1017 aaPredicted RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 ELMO3Q96BJ8 720 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 RAB34Q9BZG1 259 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 GNL3LQ9NVN8 582 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 BABAM1Q9NWV8 329 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 CLIC4Q9Y696 253 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 TTLL11Q8NHH1 800 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 MPHOSPH8Q99549 860 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.87□□□□□ -1.799e-7■■■■□ 21.2
CHD9-213ENST00000564845 ZNF652Q9Y2D9 606 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 UTYO14607 1347 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 NAA30Q147X3 362 aaPredicted RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 DBNDD1Q9H9R9 158 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 KRT32Q14532 448 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 ZMYND15Q9H091 742 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 NUCB2P80303 420 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 LRMPQ12912 555 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 RAB3GAP1Q15042 981 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 SMYD4Q8IYR2 804 aaPredicted RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 IPO4Q8TEX9 1081 aaKnown RBP3.87□□□□□ -1.79
CHD9-213ENST00000564845 RAI14Q9P0K7 980 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 CHRNDQ07001 517 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 HOMER1Q86YM7 354 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 PLBD2Q8NHP8 589 aa3.87□□□□□ -1.79
CHD9-213ENST00000564845 MAST3O60307 1309 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 PCDH11XQ9BZA7 1347 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 PCDH11YQ9BZA8 1340 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 MBD4O95243 580 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 HSPD1P10809 573 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 NECTIN1Q15223 517 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 PPP1R13LQ8WUF5 828 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 KCNB2Q92953 911 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 SHTN1A0MZ66 631 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 RANBP6O60518 1105 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 PTMAP06454 111 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 CDC27P30260 824 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 EN1Q05925 392 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 SAFBQ15424 915 aaKnown RBP eCLIP3.86□□□□□ -1.79
CHD9-213ENST00000564845 NBPF11Q86T75 865 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 ZNF526Q8TF50 670 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 FRYLO94915 3013 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 NR5A1Q13285 461 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 DNTTIP2Q5QJE6 756 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 FAM114A1Q8IWE2 563 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 BICD2Q8TD16 824 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 CCDC12Q8WUD4 166 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 R3HCC1Q9Y3T6 440 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 OVOS2A0A0G2JMS6 1433 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 RPAP1Q9BWH6 1393 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 H3BQV1 296 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 MYO1BO43795 1136 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 ERLIN2O94905 339 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 PPP2R5BQ15173 497 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 IFFO2Q5TF58 517 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 CALR3Q96L12 384 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 GOLPH3LQ9H4A5 285 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 EHMT1Q9H9B1 1298 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 E7EWF7 191 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 GPAA1O43292 621 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 RAD51AP2Q09MP3 1159 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 SEMA3FQ13275 785 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 HSP90B2PQ58FF3 399 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 EARS2Q5JPH6 523 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 CCDC102BQ68D86 513 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 NFXL1Q6ZNB6 911 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 NOC3LQ8WTT2 800 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 ZNF592Q92610 1267 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 ARHGEF1Q92888 912 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 PRDM10Q9NQV6 1147 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 AOX1Q06278 1338 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 AKAP17AQ02040 695 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 RASGRF1Q13972 1273 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 EHBP1Q8NDI1 1231 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 SH2D3AQ9BRG2 576 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 MRGBPQ9NV56 204 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 CYP46A1Q9Y6A2 500 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 PSDA5PKW4 1024 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 MBD3O95983 291 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 MMP14P50281 582 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 POLA2Q14181 598 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 COL5A2P05997 1499 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6L19H0YKK7 550 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 CTDNEP1O95476 244 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 CTSWP56202 376 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 NEK1Q96PY6 1258 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 LRRC27Q9C0I9 530 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 NBPF3Q9H094 633 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 STX6O43752 255 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 FGFR1OPO95684 399 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 HOXC6P09630 235 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms