RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 FAM83AQ86UY5 434 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 METTL16Q86W50 562 aaKnown RBP8.94□□□□□ -0.98
GINS3-205ENST00000564814 IFNL3Q8IZI9 196 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 FBXL16Q8N461 479 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 MTA3Q9BTC8 594 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 MXD3Q9BW11 206 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 NACAP1Q9BZK3 213 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 TM6SF1Q9BZW5 370 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 DCP1AQ9NPI6 582 aaPredicted RBP8.94□□□□□ -0.98
GINS3-205ENST00000564814 AATFQ9NY61 560 aaKnown RBP eCLIP8.94□□□□□ -0.98
GINS3-205ENST00000564814 JAG2Q9Y219 1238 aa8.94□□□□□ -0.98
GINS3-205ENST00000564814 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
GINS3-205ENST00000564814 ENTPD3O75355 529 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 MCCP23508 829 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 GMPSP49915 693 aaPredicted RBP8.93□□□□□ -0.98
GINS3-205ENST00000564814 FSTL1Q12841 308 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 KRT32Q14532 448 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 DLGAP5Q15398 846 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 CDC42EP5Q6NZY7 148 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 CCDC129Q6ZRS4 1044 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
GINS3-205ENST00000564814 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 C22orf23Q9BZE7 217 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 EHD4Q9H223 541 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 DHX36Q9H2U1 1008 aaKnown RBP8.93□□□□□ -0.98
GINS3-205ENST00000564814 ARMT1Q9H993 441 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 MYOZ2Q9NPC6 264 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 PGAP2Q9UHJ9 254 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 CNOT7Q9UIV1 285 aaKnown RBP8.93□□□□□ -0.98
GINS3-205ENST00000564814 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
GINS3-205ENST00000564814 FLT1P17948 1338 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 SIPA1L1O43166 1804 aa8.93□□□□□ -0.98
GINS3-205ENST00000564814 WDR19Q8NEZ3 1342 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 IQCA1LA6NCM1 817 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 H7C1D1 291 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 MYO1BO43795 1136 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 ABCB7O75027 752 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 CYP21A2P08686 494 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 VEGFAP15692 232 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 ZKSCAN1P17029 563 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 DYNLL1P63167 89 aaKnown RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 MAP3K10Q02779 954 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 MLLT1Q03111 559 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 TNFAIP1Q13829 316 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 IMMTQ16891 758 aaKnown RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 MIGA1Q8NAN2 632 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 SMC1BQ8NDV3 1235 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 SH3RF3Q8TEJ3 882 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 STAG1Q8WVM7 1258 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 PRMT6Q96LA8 375 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 KIF2CQ99661 725 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 NAPBQ9H115 298 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 ADARB2Q9NS39 739 aaKnown RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 PPP2R3BQ9Y5P8 575 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 SLC4A4Q9Y6R1 1079 aa8.92□□□□□ -0.98
GINS3-205ENST00000564814 GREB1LQ9C091 1923 aaPredicted RBP8.92□□□□□ -0.98
GINS3-205ENST00000564814 SLC27A2O14975 620 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 DDNO94850 711 aaPredicted RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 HMGB1P09429 215 aaKnown RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 GABPAQ06546 454 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 KIF4BQ2VIQ3 1234 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 C12orf60Q5U649 245 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 CTR9Q6PD62 1173 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 USP50Q70EL3 339 aaPredicted RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 TEX11Q8IYF3 940 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 FAM151AQ8WW52 585 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 AGXT2Q9BYV1 514 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 OSBPL5Q9H0X9 879 aaPredicted RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 ALDH8A1Q9H2A2 487 aaPredicted RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 RNF41Q9H4P4 317 aaPredicted RBP8.91□□□□□ -0.98
GINS3-205ENST00000564814 USP40Q9NVE5 1235 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 TMOD2Q9NZR1 351 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 PDE4DIPQ5VU43 2346 aa8.91□□□□□ -0.98
GINS3-205ENST00000564814 PLIN4Q96Q06 1357 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 POTECB2RU33 542 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 F8W031 263 aaPredicted RBP8.9□□□□□ -0.98
GINS3-205ENST00000564814 ZNF213O14771 459 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 PRKAB2O43741 272 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 ORC4O43929 436 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 TBC1D12O60347 775 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 PSMA5P28066 241 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
GINS3-205ENST00000564814 PPARAQ07869 468 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 TTC6Q86TZ1 520 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 APOBEC3FQ8IUX4 373 aaKnown RBP8.9□□□□□ -0.98
GINS3-205ENST00000564814 TGFBRAP1Q8WUH2 860 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 NBPF3Q9H094 633 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 CNNM2Q9H8M5 875 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 ZNF287Q9HBT7 754 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 DDX4Q9NQI0 724 aaKnown RBP8.9□□□□□ -0.98
GINS3-205ENST00000564814 ZNF70Q9UC06 446 aaPredicted RBP8.9□□□□□ -0.98
GINS3-205ENST00000564814 HACL1Q9UJ83 578 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.9□□□□□ -0.98
GINS3-205ENST00000564814 SNX14Q9Y5W7 946 aa8.9□□□□□ -0.98
GINS3-205ENST00000564814 MYH8P13535 1937 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms