RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
COMMD4-210ENST00000564587 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
COMMD4-210ENST00000564587 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
COMMD4-210ENST00000564587 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
COMMD4-210ENST00000564587 ZDHHC9Q9Y397 364 aa18.28■□□□□ 0.52
COMMD4-210ENST00000564587 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 USP17L21D6R901 530 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 ZSCAN22P10073 491 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-210ENST00000564587 RCAN1P53805 252 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 PDE4BQ07343 736 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 SCRN1Q12765 414 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 STRIP1Q5VSL9 837 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
COMMD4-210ENST00000564587 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 SMARCC2Q8TAQ2 1214 aa18.27■□□□□ 0.52
COMMD4-210ENST00000564587 PDGFDQ9GZP0 370 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-210ENST00000564587 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
COMMD4-210ENST00000564587 ORC4O43929 436 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 KDM4AO75164 1064 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 BTDP43251 543 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 PKP1Q13835 747 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 TMEM67Q5HYA8 995 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
COMMD4-210ENST00000564587 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 SYNE3Q6ZMZ3 975 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 CYB5R4Q7L1T6 521 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 ZNF784Q8NCA9 323 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-210ENST00000564587 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 PSMD1Q99460 953 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
COMMD4-210ENST00000564587 LAMB1P07942 1786 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
COMMD4-210ENST00000564587 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 HHIPL2Q6UWX4 724 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 FAM184AQ8NB25 1140 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
COMMD4-210ENST00000564587 MKRN1Q9UHC7 482 aaKnown RBP18.25■□□□□ 0.51
COMMD4-210ENST00000564587 NAP1L2Q9ULW6 460 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-210ENST00000564587 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
COMMD4-210ENST00000564587 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 CCDC69A6NI79 296 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 GOLGA8BA8MQT2 603 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 CDKL5O76039 1030 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 DPEP1P16444 411 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 GRIK5Q16478 980 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
COMMD4-210ENST00000564587 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 SH3RF3Q8TEJ3 882 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-210ENST00000564587 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
COMMD4-210ENST00000564587 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 ECE2O60344 883 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 WTAPQ15007 396 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 C12orf60Q5U649 245 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 TEX11Q8IYF3 940 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 NSUN7Q8NE18 718 aaKnown RBP18.23■□□□□ 0.51
COMMD4-210ENST00000564587 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
COMMD4-210ENST00000564587 TTF2Q9UNY4 1162 aaKnown RBP18.23■□□□□ 0.51
COMMD4-210ENST00000564587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
COMMD4-210ENST00000564587 ROBO3Q96MS0 1386 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 CPLX1O14810 134 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 ZBTB43O43298 467 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 C21orf2O43822 256 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 F13A1P00488 732 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 TEKT1Q969V4 418 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-210ENST00000564587 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 SLC12A7Q9Y666 1083 aa18.22■□□□□ 0.51
COMMD4-210ENST00000564587 NID2Q14112 1375 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 KCNA3P22001 575 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51
COMMD4-210ENST00000564587 CCT2P78371 535 aaKnown RBP18.21■□□□□ 0.51
COMMD4-210ENST00000564587 CSPP1Q1MSJ5 1256 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 APOA5Q6Q788 366 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 MYO3BQ8WXR4 1341 aa18.21■□□□□ 0.51
COMMD4-210ENST00000564587 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-210ENST00000564587 RHBDL3P58872 404 aa18.2■□□□□ 0.5
COMMD4-210ENST00000564587 C1QTNF8P60827 252 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms