RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 RASGRF1Q13972 1273 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 MTFR1Q15390 333 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 PICK1Q9NRD5 415 aa17.51■□□□□ 0.39
CDR2-204ENST00000564542 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
CDR2-204ENST00000564542 CYP2C8P10632 490 aa17.5■□□□□ 0.39
CDR2-204ENST00000564542 FCGRTP55899 365 aa17.5■□□□□ 0.39
CDR2-204ENST00000564542 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
CDR2-204ENST00000564542 SLF2Q8IX21 1173 aa17.5■□□□□ 0.39
CDR2-204ENST00000564542 NKX2-3Q8TAU0 364 aa17.5■□□□□ 0.39
CDR2-204ENST00000564542 ZHX2Q9Y6X8 837 aa17.5■□□□□ 0.39
CDR2-204ENST00000564542 CEP290O15078 2479 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 H0YGN5 161 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 PTPRAP18433 802 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 MAP3K10Q02779 954 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 PRKCZQ05513 592 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 ZSCAN29Q8IWY8 852 aaPredicted RBP17.49■□□□□ 0.39
CDR2-204ENST00000564542 FAM163AQ96GL9 167 aaPredicted RBP17.49■□□□□ 0.39
CDR2-204ENST00000564542 MEIS3Q99687 375 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
CDR2-204ENST00000564542 CCL5P13501 91 aa17.48■□□□□ 0.39
CDR2-204ENST00000564542 GJA8P48165 433 aa17.48■□□□□ 0.39
CDR2-204ENST00000564542 SPTY2D1Q68D10 685 aaPredicted RBP17.48■□□□□ 0.39
CDR2-204ENST00000564542 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
CDR2-204ENST00000564542 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
CDR2-204ENST00000564542 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
CDR2-204ENST00000564542 CTNND1O60716 968 aaKnown RBP17.47■□□□□ 0.39
CDR2-204ENST00000564542 GJB1P08034 283 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 BTDP43251 543 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 UBXN2AP68543 259 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 UBE2Q1Q7Z7E8 422 aa17.47■□□□□ 0.39
CDR2-204ENST00000564542 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
CDR2-204ENST00000564542 TIMM10P62072 90 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 PICALMQ13492 652 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.39
CDR2-204ENST00000564542 GADL1Q6ZQY3 521 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 XAGE2Q96GT9 111 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 RNF208Q9H0X6 261 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
CDR2-204ENST00000564542 AKAP2Q9Y2D5 859 aa17.46■□□□□ 0.39
CDR2-204ENST00000564542 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
CDR2-204ENST00000564542 MECOMQ03112 1051 aa17.45■□□□□ 0.38
CDR2-204ENST00000564542 MTX1Q13505 466 aa17.45■□□□□ 0.38
CDR2-204ENST00000564542 GABRQQ9UN88 632 aa17.45■□□□□ 0.38
CDR2-204ENST00000564542 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
CDR2-204ENST00000564542 LOC285556D6RIA3 1793 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
CDR2-204ENST00000564542 GNAI3P08754 354 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 SLURP2P0DP57 97 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 RHBDL3P58872 404 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 TFCP2Q12800 502 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
CDR2-204ENST00000564542 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 DPF3Q92784 378 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
CDR2-204ENST00000564542 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
CDR2-204ENST00000564542 TRIOBPQ9H2D6 2365 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 ATAD5Q96QE3 1844 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 TBC1D12O60347 775 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
CDR2-204ENST00000564542 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 PXYLP1Q8TE99 480 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 ZNF384Q8TF68 577 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
CDR2-204ENST00000564542 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.43■□□□□ 0.38
CDR2-204ENST00000564542 AGTPBP1Q9UPW5 1226 aa17.43■□□□□ 0.38
CDR2-204ENST00000564542 TNPO2O14787 897 aaKnown RBP17.42■□□□□ 0.38
CDR2-204ENST00000564542 ADCY3O60266 1144 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
CDR2-204ENST00000564542 FLT3LGP49771 235 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 GSTO1P78417 241 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 IRF5Q13568 498 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 PNMA3Q9UL41 463 aa17.42■□□□□ 0.38
CDR2-204ENST00000564542 MAST2Q6P0Q8 1798 aa17.41■□□□□ 0.38
CDR2-204ENST00000564542 FARP2O94887 1054 aaPredicted RBP17.41■□□□□ 0.38
CDR2-204ENST00000564542 INHAP05111 366 aa17.41■□□□□ 0.38
CDR2-204ENST00000564542 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
CDR2-204ENST00000564542 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
CDR2-204ENST00000564542 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
CDR2-204ENST00000564542 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
CDR2-204ENST00000564542 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
CDR2-204ENST00000564542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■■■■ 27.1
CDR2-204ENST00000564542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
CDR2-204ENST00000564542 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
CDR2-204ENST00000564542 SGPL1O95470 568 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 LDHCP07864 332 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 ELNP15502 786 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms