RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 SDR42E1Q8WUS8 393 aa22.4■■□□□ 1.18
SPNS1-206ENST00000564476 TAOK2Q9UL54 1235 aa22.4■■□□□ 1.18
SPNS1-206ENST00000564476 PCDHAC2Q9Y5I4 1007 aa22.4■■□□□ 1.18
SPNS1-206ENST00000564476 RBM8AQ9Y5S9 174 aaKnown RBP22.4■■□□□ 1.18
SPNS1-206ENST00000564476 HSPA4P34932 840 aa22.39■■□□□ 1.17
SPNS1-206ENST00000564476 TNFAIP1Q13829 316 aa22.39■■□□□ 1.17
SPNS1-206ENST00000564476 NBPF9Q3BBW0 867 aa22.39■■□□□ 1.17
SPNS1-206ENST00000564476 FAM83AQ86UY5 434 aa22.39■■□□□ 1.17
SPNS1-206ENST00000564476 RBM46Q8TBY0 533 aaKnown RBP22.39■■□□□ 1.17
SPNS1-206ENST00000564476 ZC3H15Q8WU90 426 aaKnown RBP22.39■■□□□ 1.17
SPNS1-206ENST00000564476 ARPP21Q9UBL0 812 aaPredicted RBP22.39■■□□□ 1.17
SPNS1-206ENST00000564476 CEP350Q5VT06 3117 aa22.39■■□□□ 1.17
SPNS1-206ENST00000564476 BAZ2AQ9UIF9 1905 aaKnown RBP22.38■■□□□ 1.17
SPNS1-206ENST00000564476 EPHX2P34913 555 aa22.38■■□□□ 1.17
SPNS1-206ENST00000564476 TNNI2P48788 182 aa22.38■■□□□ 1.17
SPNS1-206ENST00000564476 IMMTQ16891 758 aaKnown RBP22.38■■□□□ 1.17
SPNS1-206ENST00000564476 DHX36Q9H2U1 1008 aaKnown RBP22.38■■□□□ 1.17
SPNS1-206ENST00000564476 EPB41L4AQ9HCS5 686 aaPredicted RBP22.38■■□□□ 1.17
SPNS1-206ENST00000564476 MCM9Q9NXL9 1143 aa22.38■■□□□ 1.17
SPNS1-206ENST00000564476 FLT1P17948 1338 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 SCN4AP35499 1836 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 ZNF213O14771 459 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 VEGFAP15692 232 aaPredicted RBP22.37■■□□□ 1.17
SPNS1-206ENST00000564476 ZKSCAN1P17029 563 aaPredicted RBP22.37■■□□□ 1.17
SPNS1-206ENST00000564476 TSGA10IPQ3SY00 556 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 TTC6Q86TZ1 520 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 FAM151AQ8WW52 585 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 KCNB2Q92953 911 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 C22orf23Q9BZE7 217 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 MYH1P12882 1939 aa22.37■■□□□ 1.17
SPNS1-206ENST00000564476 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 EGFRP00533 1210 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 RBM25P49756 843 aaKnown RBP22.36■■□□□ 1.17
SPNS1-206ENST00000564476 ANAPC15P60006 121 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 CTR9Q6PD62 1173 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 APOBEC3FQ8IUX4 373 aaKnown RBP22.36■■□□□ 1.17
SPNS1-206ENST00000564476 MAPKAPK5Q8IW41 473 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 TRPM4Q8TD43 1214 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 OSBPL5Q9H0X9 879 aaPredicted RBP22.36■■□□□ 1.17
SPNS1-206ENST00000564476 TAF1DQ9H5J8 278 aaPredicted RBP22.36■■□□□ 1.17
SPNS1-206ENST00000564476 FAM198AQ9UFP1 575 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 ANAPC4Q9UJX5 808 aa22.36■■□□□ 1.17
SPNS1-206ENST00000564476 NAV1Q8NEY1 1877 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 POTECB2RU33 542 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 USP17L12C9JPN9 530 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 USP17L21D6R901 530 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 SLC3A2P08195 630 aaKnown RBP22.35■■□□□ 1.17
SPNS1-206ENST00000564476 NT5C2P49902 561 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 HIRAP54198 1017 aaPredicted RBP22.35■■□□□ 1.17
SPNS1-206ENST00000564476 NFIAQ12857 509 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 CREB3L3Q68CJ9 461 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 PGAP2Q9UHJ9 254 aa22.35■■□□□ 1.17
SPNS1-206ENST00000564476 LAMA4Q16363 1823 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 CLRN2A0PK11 232 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 SLC27A2O14975 620 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 POLR3DP05423 398 aaPredicted RBP22.34■■□□□ 1.17
SPNS1-206ENST00000564476 PCP11498 1178 aaKnown RBP22.34■■□□□ 1.17
SPNS1-206ENST00000564476 PICALMQ13492 652 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 KRT32Q14532 448 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 C12orf60Q5U649 245 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 IL27Q8NEV9 243 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 IL17RAQ96F46 866 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 VEZTQ9HBM0 779 aa22.34■■□□□ 1.17
SPNS1-206ENST00000564476 DDX4Q9NQI0 724 aaKnown RBP22.34■■□□□ 1.17
SPNS1-206ENST00000564476 COL2A1P02458 1487 aaPredicted RBP22.34■■□□□ 1.17
SPNS1-206ENST00000564476 PPP2R3BQ9Y5P8 575 aa22.33■■□□□ 1.17
SPNS1-206ENST00000564476 DDX60LQ5H9U9 1706 aaKnown RBP22.32■■□□□ 1.16
SPNS1-206ENST00000564476 TCP10L2B9ZVM9 353 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 HLA-DOAP06340 250 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 CYP21A2P08686 494 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 PPARAQ07869 468 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 FSTL1Q12841 308 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 FOXP4Q8IVH2 680 aaPredicted RBP22.32■■□□□ 1.16
SPNS1-206ENST00000564476 DCPSQ96C86 337 aaKnown RBP22.32■■□□□ 1.16
SPNS1-206ENST00000564476 RNF41Q9H4P4 317 aaPredicted RBP22.32■■□□□ 1.16
SPNS1-206ENST00000564476 ZNF287Q9HBT7 754 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 PI4KBQ9UBF8 816 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 ATRNL1Q5VV63 1379 aa22.32■■□□□ 1.16
SPNS1-206ENST00000564476 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
SPNS1-206ENST00000564476 APLP1P51693 650 aa22.31■■□□□ 1.16
SPNS1-206ENST00000564476 CACNB3P54284 484 aa22.31■■□□□ 1.16
SPNS1-206ENST00000564476 ANGEL2Q5VTE6 544 aaKnown RBP22.31■■□□□ 1.16
SPNS1-206ENST00000564476 EHD4Q9H223 541 aa22.31■■□□□ 1.16
SPNS1-206ENST00000564476 PALD1Q9ULE6 856 aa22.31■■□□□ 1.16
SPNS1-206ENST00000564476 LAMB1P07942 1786 aa22.3■■□□□ 1.16
SPNS1-206ENST00000564476 TCP10Q12799 353 aa22.3■■□□□ 1.16
SPNS1-206ENST00000564476 RASA3Q14644 834 aa22.3■■□□□ 1.16
SPNS1-206ENST00000564476 ZSCAN29Q8IWY8 852 aaPredicted RBP22.3■■□□□ 1.16
SPNS1-206ENST00000564476 HOOK2Q96ED9 719 aa22.3■■□□□ 1.16
SPNS1-206ENST00000564476 POLR2AP24928 1970 aaKnown RBP22.29■■□□□ 1.16
SPNS1-206ENST00000564476 FGRP09769 529 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 PSMA5P28066 241 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 AKNAD1Q5T1N1 836 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 METTL16Q86W50 562 aaKnown RBP22.29■■□□□ 1.16
SPNS1-206ENST00000564476 STAG1Q8WVM7 1258 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 TM6SF1Q9BZW5 370 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 DEFB129Q9H1M3 183 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 CNNM2Q9H8M5 875 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 GGA3Q9NZ52 723 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms