RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RTEL1Q9NZ71 1219 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 NEDD4P46934 1319 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 COBLO75128 1261 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CCDC175P0C221 793 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 MEX3CQ5U5Q3 659 aaKnown RBP14.51□□□□□ -0.09
CCDC187-201ENST00000563590 ACSBG1Q96GR2 724 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 NGLY1Q96IV0 654 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CARMIL3Q8ND23 1372 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CTAGE15A4D2H0 777 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CTAGE8P0CG41 777 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 PDIA3P30101 505 aaKnown RBP14.51□□□□□ -0.09
CCDC187-201ENST00000563590 KCNJ6P48051 423 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CTAGE6Q86UF2 777 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 PACS2Q86VP3 889 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 CTAGE4Q8IX94 777 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 FAM107BQ9H098 131 aa14.51□□□□□ -0.09
CCDC187-201ENST00000563590 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
CCDC187-201ENST00000563590 KCNQ4P56696 695 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 MUM1L1Q5H9M0 696 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 RABGGTAQ92696 567 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 MYL10Q9BUA6 226 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 FUT8Q9BYC5 575 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 A0A1W2PQ27 194 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 A0A1W2PQ64 194 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 A0A1W2PQD8 194 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 NFE2L3Q9Y4A8 694 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 PIK3C2AO00443 1686 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 SOWAHDA6NJG2 315 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
CCDC187-201ENST00000563590 MATR3P43243 847 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC187-201ENST00000563590 METTL24Q5JXM2 366 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 EP400NLQ6ZTU2 488 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 REXO1L1PQ8IX06 675 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 BPIFA3Q9BQP9 254 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 SALL1Q9NSC2 1324 aa14.5□□□□□ -0.09
CCDC187-201ENST00000563590 TOM1O60784 492 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 VWA3AA6NCI4 1184 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 TUBB4AP04350 444 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 IL2RBP14784 551 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 EXOSC10Q01780 885 aaKnown RBP14.49□□□□□ -0.09
CCDC187-201ENST00000563590 TRDNQ13061 729 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 UTYO14607 1347 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 CTAGE9A4FU28 777 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 E7EWF7 191 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 CCT5P48643 541 aa14.49□□□□□ -0.09
CCDC187-201ENST00000563590 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC187-201ENST00000563590 RGPD8O14715 1765 aaPredicted RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 GOLGA6L9A6NEM1 432 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 MAGEA9P43362 315 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 GCKRQ14397 625 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 CCDC102BQ68D86 513 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 RIN2Q8WYP3 895 aaPredicted RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 HSD3B7Q9H2F3 369 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 GUCA1BQ9UMX6 200 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 NCAPD2Q15021 1401 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 CCDC151A5D8V7 595 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 AFMP43652 599 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 ANO1Q5XXA6 986 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 CMTR1Q8N1G2 835 aaKnown RBP14.48□□□□□ -0.09
CCDC187-201ENST00000563590 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 AIFM3Q96NN9 605 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 RUFY1Q96T51 708 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 TMOD3Q9NYL9 352 aa14.48□□□□□ -0.09
CCDC187-201ENST00000563590 SRCAPQ6ZRS2 3230 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 NEURL1BA8MQ27 555 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 EXOC5O00471 708 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 RAD21O60216 631 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 GPIHBP1Q8IV16 184 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 JMYQ8N9B5 988 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 HAUS7Q99871 368 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 hCG_1642624A0A1W2PR95 340 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 NOP2P46087 812 aaKnown RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 PTPN12Q05209 780 aaKnown RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 CASP8Q14790 479 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 RNF187Q5TA31 235 aaPredicted RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 MYSM1Q5VVJ2 828 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 LDHAL6AQ6ZMR3 332 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 CEP112Q8N8E3 955 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 ANKRD20A12PQ8NF67 263 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
CCDC187-201ENST00000563590 MROH7-TTC4A0A0A0MT08 1334 aa14.47□□□□□ -0.09
CCDC187-201ENST00000563590 MINDY4BA8MYZ0 360 aa14.46□□□□□ -0.09
CCDC187-201ENST00000563590 ERLIN2O94905 339 aa14.46□□□□□ -0.09
CCDC187-201ENST00000563590 CCT6AP40227 531 aaKnown RBP14.46□□□□□ -0.09
CCDC187-201ENST00000563590 BRD3Q15059 726 aa14.46□□□□□ -0.09
CCDC187-201ENST00000563590 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
CCDC187-201ENST00000563590 GRAMD1CQ8IYS0 662 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms