RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 DENND2CQ68D51 928 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 PLA2G4DQ86XP0 818 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 SNAPC4Q5SXM2 1469 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 TEX14Q8IWB6 1497 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 CNGA1P29973 690 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 PDE6BP35913 854 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 AK2P54819 239 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 MYO1EQ12965 1108 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 B4GALNT2Q8NHY0 566 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 RAB17Q9H0T7 212 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 AHCYL1O43865 530 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 SMTNP53814 917 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 AMPD3Q01432 767 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 ZFYVE27Q5T4F4 411 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 HIBCHQ6NVY1 386 aaPredicted RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 FNBP4Q8N3X1 1017 aaPredicted RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 IKBKBO14920 756 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 E2F6O75461 281 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 LMNB1P20700 586 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 SPTY2D1Q68D10 685 aaPredicted RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 C17orf50Q8WW18 174 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 MTIF2P46199 727 aaKnown RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 ANKRD44Q8N8A2 993 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 ENAHQ8N8S7 591 aaPredicted RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 UTP6Q9NYH9 597 aaKnown RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 A0A0G2JS52 829 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 TCP1P17987 556 aaKnown RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 CHMP7Q8WUX9 453 aaPredicted RBP6.97□□□□□ -1.29
CLK3-212ENST00000563418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK3-212ENST00000563418 ITSN2Q9NZM3 1697 aa6.97□□□□□ -1.29
CLK3-212ENST00000563418 IQCA1LA6NCM1 817 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 EIF3HO15372 352 aaKnown RBP eCLIP6.96□□□□□ -1.29
CLK3-212ENST00000563418 TADA3O75528 432 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 POLD1P28340 1107 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 GYS2P54840 703 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 EIF3BP55884 814 aaKnown RBP6.96□□□□□ -1.29
CLK3-212ENST00000563418 CALCOCO2Q13137 446 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 PARVBQ9HBI1 364 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 PLXNC1O60486 1568 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 KIF9Q9HAQ2 790 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 PAPOLBQ9NRJ5 636 aaKnown RBP6.96□□□□□ -1.29
CLK3-212ENST00000563418 COL17A1Q9UMD9 1497 aaPredicted RBP6.96□□□□□ -1.29
CLK3-212ENST00000563418 ENO4A6NNW6 628 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 RPS6KA5O75582 802 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 ATP2B2Q01814 1243 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 KRT71Q3SY84 523 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 MAP7D3Q8IWC1 876 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 PDP2Q9P2J9 529 aa6.96□□□□□ -1.29
CLK3-212ENST00000563418 PECAM1P16284 738 aaPredicted RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 SCP2P22307 547 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 NMIQ13287 307 aaPredicted RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 GLE1Q53GS7 698 aaKnown RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 KLHL29Q96CT2 875 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 LRRC27Q9C0I9 530 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 CUL7Q14999 1698 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 CAND2O75155 1236 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 SLC4A2P04920 1241 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 CCT6AP40227 531 aaKnown RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 ATP1A2P50993 1020 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 KLC1Q07866 573 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 SCRN1Q12765 414 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 IQSEC3Q9UPP2 1182 aaPredicted RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 SAMM50Q9Y512 469 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 H2AFXP16104 143 aaPredicted RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 LMNB2Q03252 620 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 SEMA3FQ13275 785 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 EIF2AQ9BY44 585 aaKnown RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLK3-212ENST00000563418 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 RNF217Q8TC41 542 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 OSBPL5Q9H0X9 879 aaPredicted RBP6.96□□□□□ -1.3
CLK3-212ENST00000563418 NRDE2Q9H7Z3 1164 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 PRKAR2BP31323 418 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 SLC4A8Q2Y0W8 1093 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 NSD3Q9BZ95 1437 aa6.96□□□□□ -1.3
CLK3-212ENST00000563418 PSMA7O14818 248 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 LIN7AO14910 233 aaPredicted RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 UBXN1Q04323 297 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 NFE2L2Q16236 605 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 AACSQ86V21 672 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 TRIM42Q8IWZ5 723 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 DRC3Q9H069 523 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 A1CFQ9NQ94 594 aaKnown RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 ZBTB10Q96DT7 871 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 RGS16O15492 202 aaPredicted RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 HNRNPCL1O60812 293 aaKnown RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 ABCB6Q9NP58 842 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 TSC22D4Q9Y3Q8 395 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 AK9Q5TCS8 1911 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 ESRRGP62508 458 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 NNTQ13423 1086 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 CYLC2Q14093 348 aaPredicted RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 TTC39AQ5SRH9 613 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 LARP1Q6PKG0 1096 aaKnown RBP6.95□□□□□ -1.3
CLK3-212ENST00000563418 CUL5Q93034 780 aa6.95□□□□□ -1.3
CLK3-212ENST00000563418 BPIFA3Q9BQP9 254 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms