RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TNPO2O14787 897 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 COL6A1P12109 1028 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 TRIM32Q13049 653 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 RALBP1Q15311 655 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 LMBR1LQ6UX01 489 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 LDHAL6AQ6ZMR3 332 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 LINS1Q8NG48 757 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 FAM151AQ8WW52 585 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 C11orf49Q9H6J7 331 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 SLC45A1Q9Y2W3 748 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 RLFQ13129 1914 aa9.85□□□□□ -0.83
HERPUD1-206ENST00000563343 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 COL9A1P20849 921 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 FLIIQ13045 1269 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 TBC1D22AQ8WUA7 517 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 DNAAF4Q8WXU2 420 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 TMOD2Q9NZR1 351 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
HERPUD1-206ENST00000563343 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 HMGCRP04035 888 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 NFIAQ12857 509 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 MAP3K21Q5TCX8 1036 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 HHIPL2Q6UWX4 724 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 FASTKD5Q7L8L6 764 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 CDX2Q99626 313 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 STK31Q9BXU1 1019 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 PUS3Q9BZE2 481 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 CNNM1Q9NRU3 951 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 FAM198AQ9UFP1 575 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 GJD2Q9UKL4 321 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
HERPUD1-206ENST00000563343 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 APAF1O14727 1248 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 MDM2Q00987 491 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 TCP10Q12799 353 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 FAM110CQ1W6H9 321 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 LRRC26Q2I0M4 334 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 ZFPM1Q8IX07 1006 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 SCYL3Q8IZE3 742 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 ANKRD13CQ8N6S4 541 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 MAFAQ8NHW3 353 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 TRIB2Q92519 343 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 COA7Q96BR5 231 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 RAPGEFL1Q9UHV5 662 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 TAOK2Q9UL54 1235 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 SUGT1Q9Y2Z0 365 aa9.82□□□□□ -0.84
HERPUD1-206ENST00000563343 RFX7Q2KHR2 1363 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 SLURP2P0DP57 97 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 PTPRAP18433 802 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 MAP3K10Q02779 954 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 WDR43Q15061 677 aaKnown RBP eCLIP9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 CCDC57Q2TAC2 916 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 BEND3Q5T5X7 828 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 CDC42EP5Q6NZY7 148 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 VGLL2Q8N8G2 317 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 TSR2Q969E8 191 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 DAGLAQ9Y4D2 1042 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 MAST3O60307 1309 aa9.81□□□□□ -0.84
HERPUD1-206ENST00000563343 SIPA1L1O43166 1804 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 TAF7LQ5H9L4 462 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 TREML2Q5T2D2 321 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 KAZALD1Q96I82 304 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 TTYH1Q9H313 450 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 AGTPBP1Q9UPW5 1226 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 MROH5Q6ZUA9 1318 aa9.8□□□□□ -0.84
HERPUD1-206ENST00000563343 LHX8Q68G74 356 aa9.79□□□□□ -0.84
HERPUD1-206ENST00000563343 MYLIPQ8WY64 445 aa9.79□□□□□ -0.84
HERPUD1-206ENST00000563343 SEMA6BQ9H3T3 888 aa9.79□□□□□ -0.84
HERPUD1-206ENST00000563343 CDK5RAP2Q96SN8 1893 aa9.79□□□□□ -0.84
HERPUD1-206ENST00000563343 BDP1A6H8Y1 2624 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 F6X3S4 739 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 GRM8O00222 908 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 LRRC24Q50LG9 513 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 CCDC84Q86UT8 332 aaPredicted RBP9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 VPS37DQ86XT2 251 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 KIF16BQ96L93 1317 aa9.78□□□□□ -0.84
HERPUD1-206ENST00000563343 TNFRSF10AO00220 468 aa9.77□□□□□ -0.85
HERPUD1-206ENST00000563343 FRAT2O75474 233 aaPredicted RBP9.77□□□□□ -0.85
HERPUD1-206ENST00000563343 PDE8BO95263 885 aa9.77□□□□□ -0.85
HERPUD1-206ENST00000563343 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-206ENST00000563343 FGFR2P21802 821 aa9.77□□□□□ -0.85
HERPUD1-206ENST00000563343 PLA2G5P39877 138 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms