RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 LCORLQ8N3X6 602 aa17.65■□□□□ 0.42
CDH11-207ENST00000563255 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
CDH11-207ENST00000563255 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
CDH11-207ENST00000563255 ZNF408Q9H9D4 720 aa17.65■□□□□ 0.42
CDH11-207ENST00000563255 AATFQ9NY61 560 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDH11-207ENST00000563255 PGAP2Q9UHJ9 254 aa17.65■□□□□ 0.42
CDH11-207ENST00000563255 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 AOC2O75106 756 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 BTDP43251 543 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 DYNLL1P63167 89 aaKnown RBP17.64■□□□□ 0.41
CDH11-207ENST00000563255 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 MTMR14Q8NCE2 650 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
CDH11-207ENST00000563255 TRPM7Q96QT4 1865 aa17.64■□□□□ 0.41
CDH11-207ENST00000563255 DDX60LQ5H9U9 1706 aaKnown RBP17.64■□□□□ 0.41
CDH11-207ENST00000563255 MAP2K2P36507 400 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 ZNF280AP59817 542 aaPredicted RBP17.63■□□□□ 0.41
CDH11-207ENST00000563255 ALX1Q15699 326 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 MICALL2Q8IY33 904 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 TRPM4Q8TD43 1214 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 CRNKL1Q9BZJ0 848 aaKnown RBP17.63■□□□□ 0.41
CDH11-207ENST00000563255 SLC4A4Q9Y6R1 1079 aa17.63■□□□□ 0.41
CDH11-207ENST00000563255 FOXP2O15409 715 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 SLC34A2O95436 690 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 CFAP100Q494V2 611 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
CDH11-207ENST00000563255 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 C22orf23Q9BZE7 217 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
CDH11-207ENST00000563255 ZMYM6O95789 1325 aa17.62■□□□□ 0.41
CDH11-207ENST00000563255 MYH8P13535 1937 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 HSPA4P34932 840 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
CDH11-207ENST00000563255 RBM5P52756 815 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDH11-207ENST00000563255 RHBDL3P58872 404 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 NECTIN1Q15223 517 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 SAMD7Q7Z3H4 446 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
CDH11-207ENST00000563255 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 RBM8AQ9Y5S9 174 aaKnown RBP17.61■□□□□ 0.41
CDH11-207ENST00000563255 THSD7BQ9C0I4 1608 aa17.61■□□□□ 0.41
CDH11-207ENST00000563255 APPP05067 770 aa17.6■□□□□ 0.41
CDH11-207ENST00000563255 MCCP23508 829 aa17.6■□□□□ 0.41
CDH11-207ENST00000563255 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
CDH11-207ENST00000563255 NACAP1Q9BZK3 213 aa17.6■□□□□ 0.41
CDH11-207ENST00000563255 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
CDH11-207ENST00000563255 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 PRKAB2O43741 272 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 FGAP02671 866 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 DLGAP5Q15398 846 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
CDH11-207ENST00000563255 RBM26Q5T8P6 1007 aaKnown RBP17.59■□□□□ 0.41
CDH11-207ENST00000563255 CDC42EP5Q6NZY7 148 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 DLK2Q6UY11 383 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 SDR42E1Q8WUS8 393 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 KCNB2Q92953 911 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
CDH11-207ENST00000563255 HHIPL1Q96JK4 782 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 PRMT6Q96LA8 375 aaPredicted RBP17.59■□□□□ 0.41
CDH11-207ENST00000563255 MYOZ2Q9NPC6 264 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 USP40Q9NVE5 1235 aa17.59■□□□□ 0.41
CDH11-207ENST00000563255 USP5P45974 858 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
CDH11-207ENST00000563255 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 TEX11Q8IYF3 940 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.4
CDH11-207ENST00000563255 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
CDH11-207ENST00000563255 PCDHAC2Q9Y5I4 1007 aa17.58■□□□□ 0.4
CDH11-207ENST00000563255 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
CDH11-207ENST00000563255 ANAPC15P60006 121 aa17.57■□□□□ 0.4
CDH11-207ENST00000563255 TSGA10IPQ3SY00 556 aa17.57■□□□□ 0.4
CDH11-207ENST00000563255 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
CDH11-207ENST00000563255 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
CDH11-207ENST00000563255 NAPBQ9H115 298 aa17.57■□□□□ 0.4
CDH11-207ENST00000563255 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
CDH11-207ENST00000563255 EGFRP00533 1210 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 TDO2P48775 406 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 HUNKP57058 714 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
CDH11-207ENST00000563255 SBK1Q52WX2 424 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 KRT26Q7Z3Y9 468 aa17.56■□□□□ 0.4
CDH11-207ENST00000563255 DCPSQ96C86 337 aaKnown RBP17.56■□□□□ 0.4
CDH11-207ENST00000563255 TDRD3Q9H7E2 651 aaKnown RBP17.56■□□□□ 0.4
CDH11-207ENST00000563255 WNT10BO00744 389 aa17.55■□□□□ 0.4
CDH11-207ENST00000563255 SLC27A2O14975 620 aa17.55■□□□□ 0.4
CDH11-207ENST00000563255 CA12O43570 354 aa17.55■□□□□ 0.4
CDH11-207ENST00000563255 MYO1BO43795 1136 aa17.55■□□□□ 0.4
CDH11-207ENST00000563255 CYP21A2P08686 494 aa17.55■□□□□ 0.4
CDH11-207ENST00000563255 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms