RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 CAMK4Q16566 473 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 TAF7LQ5H9L4 462 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 SYNE3Q6ZMZ3 975 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 ZNF598Q86UK7 904 aaKnown RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 PDCL2Q8N4E4 241 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 ZBTB38Q8NAP3 1195 aaPredicted RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
CFDP1-202ENST00000562602 PGBD1Q96JS3 809 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 KCND1Q9NSA2 647 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 POLR3EQ9NVU0 708 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 CLIP2Q9UDT6 1046 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 C5P01031 1676 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 TNS2Q63HR2 1409 aa8.71□□□□□ -1.02
CFDP1-202ENST00000562602 ZNF213O14771 459 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 CCP110O43303 1012 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 UQCRFS1P1P0C7P4 283 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 ADD1P35611 737 aaKnown RBP8.7□□□□□ -1.02
CFDP1-202ENST00000562602 ME1P48163 572 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 CCDC129Q6ZRS4 1044 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 LUZP1Q86V48 1076 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 WASF1Q92558 559 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 EDC3Q96F86 508 aaKnown RBP8.7□□□□□ -1.02
CFDP1-202ENST00000562602 DDX11Q96FC9 970 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 C8orf76Q96K31 380 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 TCEANC2Q96MN5 208 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 TIGD1Q96MW7 591 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 SPSB2Q99619 263 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 CCDC94Q9BW85 323 aaPredicted RBP8.7□□□□□ -1.02
CFDP1-202ENST00000562602 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 MAST3O60307 1309 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 ZMYM6O95789 1325 aa8.7□□□□□ -1.02
CFDP1-202ENST00000562602 ARFGEF2Q9Y6D5 1785 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TIMM10P62072 90 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 IQCB1Q15051 598 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 STK38Q15208 465 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 UBE3CQ15386 1083 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 ALX1Q15699 326 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TMED8Q6PL24 325 aaPredicted RBP8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TTLL7Q6ZT98 887 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 STOX1Q6ZVD7 989 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 ELOA2Q8IYF1 753 aaPredicted RBP8.69□□□□□ -1.02
CFDP1-202ENST00000562602 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
CFDP1-202ENST00000562602 FSIP1Q8NA03 581 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 SPC24Q8NBT2 197 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 ENGASEQ8NFI3 743 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 FBXO18Q8NFZ0 1043 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TMEM87BQ96K49 555 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 SEC62Q99442 399 aaKnown RBP8.69□□□□□ -1.02
CFDP1-202ENST00000562602 SDF4Q9BRK5 362 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TMOD3Q9NYL9 352 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 HOOK1Q9UJC3 728 aaKnown RBP8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 CARMIL3Q8ND23 1372 aa8.69□□□□□ -1.02
CFDP1-202ENST00000562602 TCHHQ07283 1943 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 ANKRD18BA2A2Z9 1011 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 SPTLC2O15270 562 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CTIFO43310 598 aaKnown RBP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 PRC1O43663 620 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 GDF9O60383 454 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CTDNEP1O95476 244 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 PTGS1P23219 599 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CMA1P23946 247 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 KCNJ6P48051 423 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 SNW1Q13573 536 aaKnown RBP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CHRNA2Q15822 529 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 FAM173BQ6P4H8 233 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 MB21D2Q8IYB1 491 aaPredicted RBP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 LINC00301Q8NCQ3 95 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 XAGE2Q96GT9 111 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CCDC34Q96HJ3 373 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 ZNF830Q96NB3 372 aaPredicted RBP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 FEZ1Q99689 392 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 DNAJC25Q9H1X3 360 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 KCNF1Q9H3M0 494 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 CNNM2Q9H8M5 875 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 TAF6LQ9Y6J9 622 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
CFDP1-202ENST00000562602 AFDNP55196 1824 aaKnown RBP8.68□□□□□ -1.02
CFDP1-202ENST00000562602 ERVV-1B6SEH8 477 aa8.67□□□□□ -1.02
CFDP1-202ENST00000562602 AP5Z1O43299 807 aa8.67□□□□□ -1.02
CFDP1-202ENST00000562602 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
CFDP1-202ENST00000562602 PPP6R2O75170 966 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms