RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 RHPN1Q8TCX5 695 aa21.78■■□□□ 1.08
CMTM3-204ENST00000562357 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
CMTM3-204ENST00000562357 TLR7Q9NYK1 1049 aaKnown RBP21.78■■□□□ 1.08
CMTM3-204ENST00000562357 RFX7Q2KHR2 1363 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 TESPA1A2RU30 521 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-204ENST00000562357 CCDC85CA6NKD9 419 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 APBB1O00213 710 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 FKTNO75072 461 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 RAB11FIP3O75154 756 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 PLCG2P16885 1265 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
CMTM3-204ENST00000562357 NPM3O75607 178 aaKnown RBP21.76■■□□□ 1.07
CMTM3-204ENST00000562357 CYP2E1P05181 493 aaPredicted RBP21.76■■□□□ 1.07
CMTM3-204ENST00000562357 CETPP11597 493 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 INPP5BP32019 993 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 ZAP70P43403 619 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 PPATQ06203 517 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 PPIL2Q13356 520 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 SNAPC2Q13487 334 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 ZFPM1Q8IX07 1006 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 TEX11Q8IYF3 940 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 ZNF384Q8TF68 577 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 ZNF112Q9UJU3 913 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 AK9Q5TCS8 1911 aa21.76■■□□□ 1.07
CMTM3-204ENST00000562357 IFIT2P09913 472 aaKnown RBP21.75■■□□□ 1.07
CMTM3-204ENST00000562357 RHBDL3P58872 404 aa21.75■■□□□ 1.07
CMTM3-204ENST00000562357 PKN2Q16513 984 aaKnown RBP21.75■■□□□ 1.07
CMTM3-204ENST00000562357 MS4A4AQ96JQ5 239 aa21.75■■□□□ 1.07
CMTM3-204ENST00000562357 PICK1Q9NRD5 415 aa21.75■■□□□ 1.07
CMTM3-204ENST00000562357 IDH1O75874 414 aaKnown RBP21.74■■□□□ 1.07
CMTM3-204ENST00000562357 NOL9Q5SY16 702 aaKnown RBP21.74■■□□□ 1.07
CMTM3-204ENST00000562357 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
CMTM3-204ENST00000562357 BRI3BPQ8WY22 251 aa21.74■■□□□ 1.07
CMTM3-204ENST00000562357 BCL11AQ9H165 835 aa21.74■■□□□ 1.07
CMTM3-204ENST00000562357 DDX4Q9NQI0 724 aaKnown RBP21.74■■□□□ 1.07
CMTM3-204ENST00000562357 IRF6O14896 467 aa21.73■■□□□ 1.07
CMTM3-204ENST00000562357 CRHR2Q13324 411 aa21.73■■□□□ 1.07
CMTM3-204ENST00000562357 PTPN18Q99952 460 aa21.73■■□□□ 1.07
CMTM3-204ENST00000562357 AATFQ9NY61 560 aaKnown RBP eCLIP21.73■■□□□ 1.07
CMTM3-204ENST00000562357 DDTLA6NHG4 134 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-204ENST00000562357 MAP3K12Q12852 859 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 TAF1CQ15572 869 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-204ENST00000562357 TMED8Q6PL24 325 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-204ENST00000562357 SH3BP5LQ7L8J4 393 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 CERS3Q8IU89 383 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 SIRT2Q8IXJ6 389 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 ZFYVE28Q9HCC9 887 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 PIH1D3Q9NQM4 214 aaKnown RBP21.72■■□□□ 1.07
CMTM3-204ENST00000562357 PCDH10Q9P2E7 1040 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 ATRNL1Q5VV63 1379 aa21.72■■□□□ 1.07
CMTM3-204ENST00000562357 LAMB1P07942 1786 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 MAST2Q6P0Q8 1798 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 CYP7A1P22680 504 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 TTF1Q15361 905 aaPredicted RBP21.71■■□□□ 1.07
CMTM3-204ENST00000562357 SCYL3Q8IZE3 742 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 SH3RF3Q8TEJ3 882 aaPredicted RBP21.71■■□□□ 1.07
CMTM3-204ENST00000562357 ERO1AQ96HE7 468 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 OSBPL5Q9H0X9 879 aaPredicted RBP21.71■■□□□ 1.07
CMTM3-204ENST00000562357 R3HDMLQ9H3Y0 253 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 ZCCHC17Q9NP64 241 aaKnown RBP21.71■■□□□ 1.07
CMTM3-204ENST00000562357 DOCK2Q92608 1830 aa21.71■■□□□ 1.07
CMTM3-204ENST00000562357 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
CMTM3-204ENST00000562357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.7■■□□□ 1.06
CMTM3-204ENST00000562357 COL2A1P02458 1487 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-204ENST00000562357 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
CMTM3-204ENST00000562357 PPP4CP60510 307 aa21.69■■□□□ 1.06
CMTM3-204ENST00000562357 TRIM34Q9BYJ4 488 aa21.69■■□□□ 1.06
CMTM3-204ENST00000562357 DHX36Q9H2U1 1008 aaKnown RBP21.69■■□□□ 1.06
CMTM3-204ENST00000562357 PHF20L1A8MW92 1017 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 TBC1D12O60347 775 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 MAP3K10Q02779 954 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 ARHGEF6Q15052 776 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 MAGEB6Q8N7X4 407 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 LRRCC1Q9C099 1032 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 KCNH4Q9UQ05 1017 aa21.68■■□□□ 1.06
CMTM3-204ENST00000562357 SP3Q02447 781 aa21.67■■□□□ 1.06
CMTM3-204ENST00000562357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.67■■□□□ 1.06
CMTM3-204ENST00000562357 TGFBRAP1Q8WUH2 860 aa21.67■■□□□ 1.06
CMTM3-204ENST00000562357 DNAJC2Q99543 621 aaKnown RBP21.67■■□□□ 1.06
CMTM3-204ENST00000562357 PI4KBQ9UBF8 816 aa21.67■■□□□ 1.06
CMTM3-204ENST00000562357 NDUFB9Q9Y6M9 179 aa21.67■■□□□ 1.06
CMTM3-204ENST00000562357 BTBD19C9JJ37 291 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 CXCL11O14625 94 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 FBXO46Q6PJ61 603 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-204ENST00000562357 ADGRA1Q86SQ6 560 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 HERC5Q9UII4 1024 aaKnown RBP21.66■■□□□ 1.06
CMTM3-204ENST00000562357 TRIM17Q9Y577 477 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 ZHX2Q9Y6X8 837 aa21.66■■□□□ 1.06
CMTM3-204ENST00000562357 FLT1P17948 1338 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 HLA-DOAP06340 250 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 PTPRAP18433 802 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 ANKRD23Q86SG2 305 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 MIGA1Q8NAN2 632 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 ANTXR1Q9H6X2 564 aa21.65■■□□□ 1.06
CMTM3-204ENST00000562357 USP5P45974 858 aa21.64■■□□□ 1.05
CMTM3-204ENST00000562357 RRP1P56182 461 aaKnown RBP21.64■■□□□ 1.05
CMTM3-204ENST00000562357 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
CMTM3-204ENST00000562357 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms