RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 SLFNL1Q499Z3 407 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 LDLRAD1Q5T700 205 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 PRAMEF18Q5VWM3 479 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 ZFPM1Q8IX07 1006 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 APPBP2Q92624 585 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
CDH1-204ENST00000562118 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
CDH1-204ENST00000562118 ZMYM1Q5SVZ6 1142 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 TEX11Q8IYF3 940 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 OSBP2Q969R2 916 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
CDH1-204ENST00000562118 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
CDH1-204ENST00000562118 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
CDH1-204ENST00000562118 TBC1D12O60347 775 aa16.21■□□□□ 0.19
CDH1-204ENST00000562118 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
CDH1-204ENST00000562118 LCORLQ8N3X6 602 aa16.21■□□□□ 0.19
CDH1-204ENST00000562118 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
CDH1-204ENST00000562118 DDTLA6NHG4 134 aaPredicted RBP16.2■□□□□ 0.18
CDH1-204ENST00000562118 NF2P35240 595 aa16.2■□□□□ 0.18
CDH1-204ENST00000562118 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
CDH1-204ENST00000562118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDH1-204ENST00000562118 HOOK2Q96ED9 719 aa16.2■□□□□ 0.18
CDH1-204ENST00000562118 USP2O75604 605 aaPredicted RBP16.19■□□□□ 0.18
CDH1-204ENST00000562118 HTRA3P83110 453 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 TCP10Q12799 353 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 KLRG1Q96E93 195 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 STRBPQ96SI9 672 aaKnown RBP16.19■□□□□ 0.18
CDH1-204ENST00000562118 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
CDH1-204ENST00000562118 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
CDH1-204ENST00000562118 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 MBD4O95243 580 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 GIMAP6Q6P9H5 292 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
CDH1-204ENST00000562118 EHD4Q9H223 541 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
CDH1-204ENST00000562118 ATP8A2Q9NTI2 1148 aa16.18■□□□□ 0.18
CDH1-204ENST00000562118 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 FAM155AB1AL88 458 aaPredicted RBP16.17■□□□□ 0.18
CDH1-204ENST00000562118 M0R2C6 588 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 FOXP2O15409 715 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 PPP1R12BO60237 982 aaPredicted RBP16.17■□□□□ 0.18
CDH1-204ENST00000562118 HUNKP57058 714 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 PICALMQ13492 652 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 DCAF15Q66K64 600 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 MOB2Q70IA6 237 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 PTPRFP10586 1907 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 MYH8P13535 1937 aa16.17■□□□□ 0.18
CDH1-204ENST00000562118 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
CDH1-204ENST00000562118 GPAA1O43292 621 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 SLC10A3P09131 477 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 SDSP20132 328 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 GABPAQ06546 454 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 NOL9Q5SY16 702 aaKnown RBP16.16■□□□□ 0.18
CDH1-204ENST00000562118 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.16■□□□□ 0.18
CDH1-204ENST00000562118 ARMC9Q7Z3E5 817 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 DNAJC18Q9H819 358 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
CDH1-204ENST00000562118 HERC5Q9UII4 1024 aaKnown RBP16.16■□□□□ 0.18
CDH1-204ENST00000562118 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 A0A0D9SFI3 127 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 GSG1L2A8MUP6 293 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 GNAT2P19087 354 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
CDH1-204ENST00000562118 DEFB115Q30KQ5 88 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 RGMBQ6NW40 437 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 RASAL3Q86YV0 1011 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 ANKRD13AQ8IZ07 590 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
CDH1-204ENST00000562118 ZNF341Q9BYN7 854 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
CDH1-204ENST00000562118 ANGEL1Q9UNK9 670 aaKnown RBP16.15■□□□□ 0.18
CDH1-204ENST00000562118 FZD1Q9UP38 647 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
CDH1-204ENST00000562118 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
CDH1-204ENST00000562118 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
CDH1-204ENST00000562118 PRKAB2O43741 272 aa16.14■□□□□ 0.17
CDH1-204ENST00000562118 SBK1Q52WX2 424 aa16.14■□□□□ 0.17
CDH1-204ENST00000562118 FAM227BQ96M60 508 aa16.14■□□□□ 0.17
CDH1-204ENST00000562118 EPB41L4AQ9HCS5 686 aaPredicted RBP16.14■□□□□ 0.17
CDH1-204ENST00000562118 SNCAIPQ9Y6H5 919 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms