RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 ZNRF3Q9ULT6 936 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 MYO3BQ8WXR4 1341 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 LTBP3Q9NS15 1303 aa16.88■□□□□ 0.29
CNN2-204ENST00000562075 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 CYP2D7A0A087X1C5 515 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 B4E1Z4 1266 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 RAD17O75943 681 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 LARGE1O95461 756 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
CNN2-204ENST00000562075 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
CNN2-204ENST00000562075 MAPKAPK5Q8IW41 473 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 BRF1Q92994 677 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
CNN2-204ENST00000562075 CHMP5Q9NZZ3 219 aa16.87■□□□□ 0.29
CNN2-204ENST00000562075 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 PSMD14O00487 310 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 CYP2D6P10635 497 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 ANTXR2P58335 489 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 ME3Q16798 604 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 RRP12Q5JTH9 1297 aaKnown RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 RSBN1LQ6PCB5 846 aaPredicted RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 FHDC1Q9C0D6 1143 aaPredicted RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
CNN2-204ENST00000562075 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
CNN2-204ENST00000562075 KDM4AO75164 1064 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 VIL1P09327 827 aaKnown RBP16.85■□□□□ 0.29
CNN2-204ENST00000562075 USP17L8P0C7I0 530 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
CNN2-204ENST00000562075 DDIT3P35638 169 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNN2-204ENST00000562075 RASSF7Q02833 373 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 CCDC83Q8IWF9 413 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 USP40Q9NVE5 1235 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 SAP30BPQ9UHR5 308 aaKnown RBP16.85■□□□□ 0.29
CNN2-204ENST00000562075 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 FLT1P17948 1338 aa16.85■□□□□ 0.29
CNN2-204ENST00000562075 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
CNN2-204ENST00000562075 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 CDC42EP5Q6NZY7 148 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 ESR2Q92731 530 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.84■□□□□ 0.29
CNN2-204ENST00000562075 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
CNN2-204ENST00000562075 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
CNN2-204ENST00000562075 SMIM22K7EJ46 135 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 PDE4BQ07343 736 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 STK3Q13188 491 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 SLC4A8Q2Y0W8 1093 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
CNN2-204ENST00000562075 NECAB1Q8N987 351 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
CNN2-204ENST00000562075 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
CNN2-204ENST00000562075 ECM29Q5VYK3 1845 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 SH2B2O14492 632 aaPredicted RBP16.82■□□□□ 0.28
CNN2-204ENST00000562075 CXCL9Q07325 125 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 PICALMQ13492 652 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 SART3Q15020 963 aaKnown RBP16.82■□□□□ 0.28
CNN2-204ENST00000562075 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 CIAPIN1Q6FI81 312 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 NKX2-3Q8TAU0 364 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
CNN2-204ENST00000562075 ZSWIM5Q9P217 1185 aa16.82■□□□□ 0.28
CNN2-204ENST00000562075 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
CNN2-204ENST00000562075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
CNN2-204ENST00000562075 MYH1P12882 1939 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 SOCS7O14512 581 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
CNN2-204ENST00000562075 ORC4O43929 436 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 PRDM1O75626 825 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 FGRP09769 529 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 EVX2Q03828 476 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 ST3GAL1Q11201 340 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 TNIP1Q15025 636 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 AGBL3Q8NEM8 1001 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
CNN2-204ENST00000562075 GMLQ99445 158 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
CNN2-204ENST00000562075 KLF18A0A0U1RQI7 1052 aa16.8■□□□□ 0.28
CNN2-204ENST00000562075 ERICH2A1L162 156 aa16.8■□□□□ 0.28
CNN2-204ENST00000562075 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
CNN2-204ENST00000562075 PFKFB2O60825 505 aa16.8■□□□□ 0.28
CNN2-204ENST00000562075 WDHD1O75717 1129 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms