RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ZNF112Q9UJU3 913 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 PLXNB2O15031 1838 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 ADCY3O60266 1144 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 INHAP05111 366 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 FLT3LGP49771 235 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 DIS3LQ8TF46 1054 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 LPIN2Q92539 896 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 PARK7Q99497 189 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 ZCCHC17Q9NP64 241 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 CDK5RAP2Q96SN8 1893 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 ATRNL1Q5VV63 1379 aa14.6□□□□□ -0.07
NSMCE1-202ENST00000561960 PHF20L1A8MW92 1017 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 PEX10O60683 326 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 GNRH1P01148 92 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 TFRCP02786 760 aaKnown RBP14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 GJB1P08034 283 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 PTPRAP18433 802 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 HOXD10P28358 340 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 UBE2Q1Q7Z7E8 422 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 ABCF2Q9UG63 623 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 LOC285556D6RIA3 1793 aa14.59□□□□□ -0.07
NSMCE1-202ENST00000561960 TNPO2O14787 897 aaKnown RBP14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 PRMT2P55345 433 aa14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 UBXN2AP68543 259 aa14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 TRIM32Q13049 653 aa14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 NOL9Q5SY16 702 aaKnown RBP14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 MRIQ9BWK5 157 aa14.58□□□□□ -0.08
NSMCE1-202ENST00000561960 SIPA1L1O43166 1804 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 A0A0G2JLL6 359 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 EVI5O60447 810 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 PRRT2Q7Z6L0 340 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 SCYL3Q8IZE3 742 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 HTATIP2Q9BUP3 242 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 ZMYND8Q9ULU4 1186 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 LRRFIP2Q9Y608 721 aaKnown RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-202ENST00000561960 BTDP43251 543 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 TIMM10P62072 90 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 C7orf61Q8IZ16 206 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 SLAIN1Q8ND83 568 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 NKX2-3Q8TAU0 364 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 PAWRQ96IZ0 340 aaKnown RBP14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 CEP126Q9P2H0 1117 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
NSMCE1-202ENST00000561960 SGPL1O95470 568 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 SYN1P17600 705 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 CCDC102BQ68D86 513 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 PRO3102Q9H379 93 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 GNL3LQ9NVN8 582 aaKnown RBP14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 PTPRCP08575 1304 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 ZNF521Q96K83 1311 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
NSMCE1-202ENST00000561960 CXCL11O14625 94 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 TBC1D9Q6ZT07 1266 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 Q7L0L9 218 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 SLC17A8Q8NDX2 589 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 ZNF384Q8TF68 577 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 NR2E3Q9Y5X4 410 aa14.54□□□□□ -0.08
NSMCE1-202ENST00000561960 FRMPD3Q5JV73 1810 aa14.53□□□□□ -0.08
NSMCE1-202ENST00000561960 DLL1O00548 723 aa14.53□□□□□ -0.08
NSMCE1-202ENST00000561960 MECOMQ03112 1051 aa14.53□□□□□ -0.08
NSMCE1-202ENST00000561960 FASTKD5Q7L8L6 764 aaKnown RBP14.53□□□□□ -0.08
NSMCE1-202ENST00000561960 DENND2AQ9ULE3 1009 aa14.53□□□□□ -0.08
NSMCE1-202ENST00000561960 GAKO14976 1311 aa14.52□□□□□ -0.08
NSMCE1-202ENST00000561960 HMGCS2P54868 508 aa14.52□□□□□ -0.09
NSMCE1-202ENST00000561960 TFCP2Q12800 502 aa14.52□□□□□ -0.09
NSMCE1-202ENST00000561960 MEIS3Q99687 375 aa14.52□□□□□ -0.09
NSMCE1-202ENST00000561960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.52□□□□□ -0.09
NSMCE1-202ENST00000561960 NOB1Q9ULX3 412 aaKnown RBP14.52□□□□□ -0.09
NSMCE1-202ENST00000561960 MROH7-TTC4A0A0A0MT08 1334 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 FOCADQ5VW36 1801 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 ENTPD3O75355 529 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 SPP2Q13103 211 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 NEUROD6Q96NK8 337 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 AGTPBP1Q9UPW5 1226 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 VCANP13611 3396 aa14.51□□□□□ -0.09
NSMCE1-202ENST00000561960 SALL1Q9NSC2 1324 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms