RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ZNF384Q8TF68 577 aa18.04■□□□□ 0.48
SPG7-205ENST00000561945 XAGE2Q96GT9 111 aa18.04■□□□□ 0.48
SPG7-205ENST00000561945 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
SPG7-205ENST00000561945 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
SPG7-205ENST00000561945 GPR75-ASB3A0A0A6YYF3 556 aa18.03■□□□□ 0.48
SPG7-205ENST00000561945 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
SPG7-205ENST00000561945 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
SPG7-205ENST00000561945 SPTY2D1Q68D10 685 aaPredicted RBP18.03■□□□□ 0.48
SPG7-205ENST00000561945 SLC45A1Q9Y2W3 748 aa18.03■□□□□ 0.48
SPG7-205ENST00000561945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.03■□□□□ 0.48
SPG7-205ENST00000561945 A0A0G2JLL6 359 aaPredicted RBP18.02■□□□□ 0.48
SPG7-205ENST00000561945 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.48
SPG7-205ENST00000561945 BCRP11274 1271 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 RHBDL3P58872 404 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 TFCP2Q12800 502 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 PRRT2Q7Z6L0 340 aaPredicted RBP18.02■□□□□ 0.48
SPG7-205ENST00000561945 TRIM47Q96LD4 638 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 SRRDQ9UH36 339 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 CPA4Q9UI42 421 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 AFG3L2Q9Y4W6 797 aa18.02■□□□□ 0.48
SPG7-205ENST00000561945 DDTLA6NHG4 134 aaPredicted RBP18.01■□□□□ 0.47
SPG7-205ENST00000561945 TBC1D12O60347 775 aa18.01■□□□□ 0.47
SPG7-205ENST00000561945 TRIM27P14373 513 aa18.01■□□□□ 0.47
SPG7-205ENST00000561945 PTPRAP18433 802 aa18.01■□□□□ 0.47
SPG7-205ENST00000561945 DZIP1Q86YF9 867 aaKnown RBP18.01■□□□□ 0.47
SPG7-205ENST00000561945 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
SPG7-205ENST00000561945 DDX4Q9NQI0 724 aaKnown RBP18.01■□□□□ 0.47
SPG7-205ENST00000561945 RANBP2P49792 3224 aaKnown RBP18.01■□□□□ 0.47
SPG7-205ENST00000561945 LOC285556D6RIA3 1793 aa18■□□□□ 0.47
SPG7-205ENST00000561945 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
SPG7-205ENST00000561945 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
SPG7-205ENST00000561945 OSBPP22059 807 aa18■□□□□ 0.47
SPG7-205ENST00000561945 ARID4AP29374 1257 aaPredicted RBP18■□□□□ 0.47
SPG7-205ENST00000561945 BTDP43251 543 aa18■□□□□ 0.47
SPG7-205ENST00000561945 PSMC4P43686 418 aa18■□□□□ 0.47
SPG7-205ENST00000561945 MECOMQ03112 1051 aa18■□□□□ 0.47
SPG7-205ENST00000561945 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
SPG7-205ENST00000561945 FASTKD5Q7L8L6 764 aaKnown RBP18■□□□□ 0.47
SPG7-205ENST00000561945 SH3TC2Q8TF17 1288 aa18■□□□□ 0.47
SPG7-205ENST00000561945 HMG20BQ9P0W2 317 aa18■□□□□ 0.47
SPG7-205ENST00000561945 ABCF2Q9UG63 623 aa18■□□□□ 0.47
SPG7-205ENST00000561945 MAST2Q6P0Q8 1798 aa17.99■□□□□ 0.47
SPG7-205ENST00000561945 HOXD10P28358 340 aa17.99■□□□□ 0.47
SPG7-205ENST00000561945 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
SPG7-205ENST00000561945 ZHX2Q9Y6X8 837 aa17.99■□□□□ 0.47
SPG7-205ENST00000561945 ATAD5Q96QE3 1844 aa17.99■□□□□ 0.47
SPG7-205ENST00000561945 GNAI2P04899 355 aa17.98■□□□□ 0.47
SPG7-205ENST00000561945 HABP4Q5JVS0 413 aaKnown RBP17.98■□□□□ 0.47
SPG7-205ENST00000561945 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
SPG7-205ENST00000561945 SPATA5Q8NB90 893 aa17.98■□□□□ 0.47
SPG7-205ENST00000561945 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
SPG7-205ENST00000561945 FOCADQ5VW36 1801 aa17.98■□□□□ 0.47
SPG7-205ENST00000561945 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 CYP2C8P10632 490 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 SIPA1L1O43166 1804 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 CDK5RAP2Q96SN8 1893 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 MYPNQ86TC9 1320 aa17.97■□□□□ 0.47
SPG7-205ENST00000561945 IGSF3O75054 1194 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 LDHCP07864 332 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 GRK4P32298 578 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 GSTO1P78417 241 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 UBE2Q1Q7Z7E8 422 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 ZSCAN29Q8IWY8 852 aaPredicted RBP17.96■□□□□ 0.47
SPG7-205ENST00000561945 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
SPG7-205ENST00000561945 BCAR3O75815 825 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
SPG7-205ENST00000561945 SLURP2P0DP57 97 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 MCAMP43121 646 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 FCGRTP55899 365 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 PICALMQ13492 652 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 POLA2Q14181 598 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 MTFR1Q15390 333 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 NEUROD6Q96NK8 337 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 OSBPL5Q9H0X9 879 aaPredicted RBP17.95■□□□□ 0.46
SPG7-205ENST00000561945 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 TRIOBPQ9H2D6 2365 aa17.95■□□□□ 0.46
SPG7-205ENST00000561945 GJB1P08034 283 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 UQCRFS1P1P0C7P4 283 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 GJA8P48165 433 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 PRKCZQ05513 592 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 PI16Q6UXB8 463 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 RAET1EQ8TD07 263 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 AGTPBP1Q9UPW5 1226 aa17.94■□□□□ 0.46
SPG7-205ENST00000561945 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
SPG7-205ENST00000561945 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
SPG7-205ENST00000561945 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
SPG7-205ENST00000561945 SSH3Q8TE77 659 aa17.93■□□□□ 0.46
SPG7-205ENST00000561945 ZNF512BQ96KM6 892 aaPredicted RBP17.93■□□□□ 0.46
SPG7-205ENST00000561945 ECM2O94769 699 aaPredicted RBP17.92■□□□□ 0.46
SPG7-205ENST00000561945 MYCP01106 439 aaPredicted RBP17.92■□□□□ 0.46
SPG7-205ENST00000561945 CAPN2P17655 700 aa17.92■□□□□ 0.46
SPG7-205ENST00000561945 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPG7-205ENST00000561945 IRF5Q13568 498 aa17.92■□□□□ 0.46
SPG7-205ENST00000561945 PXYLP1Q8TE99 480 aa17.92■□□□□ 0.46
SPG7-205ENST00000561945 MYO5AQ9Y4I1 1855 aaKnown RBP17.91■□□□□ 0.46
SPG7-205ENST00000561945 CCL5P13501 91 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms