RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TBC1D8O95759 1140 aa25.27■■□□□ 1.64
TPM1-232ENST00000561425 CLASRPQ8N2M8 674 aaKnown RBP25.27■■□□□ 1.64
TPM1-232ENST00000561425 ZKSCAN4Q969J2 545 aaPredicted RBP25.27■■□□□ 1.64
TPM1-232ENST00000561425 PTPN18Q99952 460 aa25.27■■□□□ 1.64
TPM1-232ENST00000561425 DDTLA6NHG4 134 aaPredicted RBP25.26■■□□□ 1.63
TPM1-232ENST00000561425 PHF20L1A8MW92 1017 aa25.26■■□□□ 1.63
TPM1-232ENST00000561425 NAA16Q6N069 864 aaPredicted RBP25.26■■□□□ 1.63
TPM1-232ENST00000561425 ERO1BQ86YB8 467 aa25.26■■□□□ 1.63
TPM1-232ENST00000561425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.26■■□□□ 1.63
TPM1-232ENST00000561425 INPP5BP32019 993 aa25.25■■□□□ 1.63
TPM1-232ENST00000561425 NOL9Q5SY16 702 aaKnown RBP25.25■■□□□ 1.63
TPM1-232ENST00000561425 TMED8Q6PL24 325 aaPredicted RBP25.25■■□□□ 1.63
TPM1-232ENST00000561425 R3HDMLQ9H3Y0 253 aa25.25■■□□□ 1.63
TPM1-232ENST00000561425 CASP8AP2Q9UKL3 1982 aa25.24■■□□□ 1.63
TPM1-232ENST00000561425 ADGRA1Q86SQ6 560 aa25.24■■□□□ 1.63
TPM1-232ENST00000561425 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.24■■□□□ 1.63
TPM1-232ENST00000561425 COL2A1P02458 1487 aaPredicted RBP25.23■■□□□ 1.63
TPM1-232ENST00000561425 GPR25O00155 361 aa25.23■■□□□ 1.63
TPM1-232ENST00000561425 TBC1D12O60347 775 aa25.23■■□□□ 1.63
TPM1-232ENST00000561425 GTF2A2P52657 109 aa25.23■■□□□ 1.63
TPM1-232ENST00000561425 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
TPM1-232ENST00000561425 PPATQ06203 517 aa25.23■■□□□ 1.63
TPM1-232ENST00000561425 ANTXR1Q9H6X2 564 aa25.23■■□□□ 1.63
TPM1-232ENST00000561425 BAG3O95817 575 aa25.22■■□□□ 1.63
TPM1-232ENST00000561425 PPIL2Q13356 520 aa25.22■■□□□ 1.63
TPM1-232ENST00000561425 SH3RF3Q8TEJ3 882 aaPredicted RBP25.22■■□□□ 1.63
TPM1-232ENST00000561425 BRI3BPQ8WY22 251 aa25.22■■□□□ 1.63
TPM1-232ENST00000561425 OTUD5Q96G74 571 aa25.22■■□□□ 1.63
TPM1-232ENST00000561425 ABHD8Q96I13 439 aa25.22■■□□□ 1.63
TPM1-232ENST00000561425 IRF6O14896 467 aa25.21■■□□□ 1.63
TPM1-232ENST00000561425 PICALMQ13492 652 aa25.21■■□□□ 1.63
TPM1-232ENST00000561425 OTUD7BQ6GQQ9 843 aa25.21■■□□□ 1.63
TPM1-232ENST00000561425 ZNF296Q8WUU4 475 aaPredicted RBP25.21■■□□□ 1.63
TPM1-232ENST00000561425 MCOLN1Q9GZU1 580 aa25.21■■□□□ 1.63
TPM1-232ENST00000561425 DCTPP1Q9H773 170 aa25.21■■□□□ 1.63
TPM1-232ENST00000561425 APBB1O00213 710 aa25.2■■□□□ 1.62
TPM1-232ENST00000561425 IFIT2P09913 472 aaKnown RBP25.2■■□□□ 1.62
TPM1-232ENST00000561425 PLCG2P16885 1265 aa25.2■■□□□ 1.62
TPM1-232ENST00000561425 OSBPL5Q9H0X9 879 aaPredicted RBP25.2■■□□□ 1.62
TPM1-232ENST00000561425 AATFQ9NY61 560 aaKnown RBP eCLIP25.2■■□□□ 1.62
TPM1-232ENST00000561425 NDUFB9Q9Y6M9 179 aa25.2■■□□□ 1.62
TPM1-232ENST00000561425 ZSCAN29Q8IWY8 852 aaPredicted RBP25.19■■□□□ 1.62
TPM1-232ENST00000561425 TEX11Q8IYF3 940 aa25.19■■□□□ 1.62
TPM1-232ENST00000561425 KCNH4Q9UQ05 1017 aa25.19■■□□□ 1.62
TPM1-232ENST00000561425 MAST2Q6P0Q8 1798 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 CCL15-CCL14A0A0B4J2E2 113 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 DGKZQ13574 1117 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 CCL15Q16663 113 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 NOL10Q9BSC4 688 aaKnown RBP25.18■■□□□ 1.62
TPM1-232ENST00000561425 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 PCDHB15Q9Y5E8 787 aa25.18■■□□□ 1.62
TPM1-232ENST00000561425 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 SLURP2P0DP57 97 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 CETPP11597 493 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 ATP5JP18859 108 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 CYP7A1P22680 504 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 MAP3K12Q12852 859 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 SNAPC2Q13487 334 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 TTF1Q15361 905 aaPredicted RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 CTU1Q7Z7A3 348 aaKnown RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 METTL16Q86W50 562 aaKnown RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 SCYL3Q8IZE3 742 aa25.17■■□□□ 1.62
TPM1-232ENST00000561425 YTHDC1Q96MU7 727 aaKnown RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 ZCCHC17Q9NP64 241 aaKnown RBP25.17■■□□□ 1.62
TPM1-232ENST00000561425 CTNND1O60716 968 aaKnown RBP25.16■■□□□ 1.62
TPM1-232ENST00000561425 CERS3Q8IU89 383 aa25.16■■□□□ 1.62
TPM1-232ENST00000561425 FAM43AQ8N2R8 423 aa25.16■■□□□ 1.62
TPM1-232ENST00000561425 DHX36Q9H2U1 1008 aaKnown RBP25.16■■□□□ 1.62
TPM1-232ENST00000561425 FKTNO75072 461 aa25.15■■□□□ 1.62
TPM1-232ENST00000561425 CRHR2Q13324 411 aa25.15■■□□□ 1.62
TPM1-232ENST00000561425 MAGEB6Q8N7X4 407 aa25.15■■□□□ 1.62
TPM1-232ENST00000561425 MYO5AQ9Y4I1 1855 aaKnown RBP25.15■■□□□ 1.62
TPM1-232ENST00000561425 PTPRAP18433 802 aa25.14■■□□□ 1.62
TPM1-232ENST00000561425 DYNLL1P63167 89 aaKnown RBP25.14■■□□□ 1.62
TPM1-232ENST00000561425 MOGSQ13724 837 aa25.14■■□□□ 1.62
TPM1-232ENST00000561425 TGFBRAP1Q8WUH2 860 aa25.14■■□□□ 1.62
TPM1-232ENST00000561425 PI4KBQ9UBF8 816 aa25.14■■□□□ 1.62
TPM1-232ENST00000561425 DOCK2Q92608 1830 aa25.14■■□□□ 1.61
TPM1-232ENST00000561425 FLT1P17948 1338 aa25.13■■□□□ 1.61
TPM1-232ENST00000561425 CXCL11O14625 94 aa25.13■■□□□ 1.61
TPM1-232ENST00000561425 HAUS7Q99871 368 aa25.13■■□□□ 1.61
TPM1-232ENST00000561425 RIOK1Q9BRS2 568 aaKnown RBP25.13■■□□□ 1.61
TPM1-232ENST00000561425 BTBD19C9JJ37 291 aa25.12■■□□□ 1.61
TPM1-232ENST00000561425 SMARCA5O60264 1052 aaPredicted RBP25.12■■□□□ 1.61
TPM1-232ENST00000561425 PKN2Q16513 984 aaKnown RBP25.12■■□□□ 1.61
TPM1-232ENST00000561425 HERC5Q9UII4 1024 aaKnown RBP25.12■■□□□ 1.61
TPM1-232ENST00000561425 AFG3L2Q9Y4W6 797 aa25.12■■□□□ 1.61
TPM1-232ENST00000561425 AK9Q5TCS8 1911 aa25.12■■□□□ 1.61
TPM1-232ENST00000561425 TCRBV5S4A2TA0A5A2 114 aa25.11■■□□□ 1.61
TPM1-232ENST00000561425 CAPN15O75808 1086 aa25.11■■□□□ 1.61
TPM1-232ENST00000561425 FOXP4Q8IVH2 680 aaPredicted RBP25.11■■□□□ 1.61
TPM1-232ENST00000561425 MAPKAPK5Q8IW41 473 aa25.11■■□□□ 1.61
TPM1-232ENST00000561425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.11■■□□□ 1.61
TPM1-232ENST00000561425 GOLIM4O00461 696 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 PDE6AP16499 860 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 RRP1BQ14684 758 aaKnown RBP25.1■■□□□ 1.61
TPM1-232ENST00000561425 SLC9C2Q5TAH2 1124 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 ANKRD23Q86SG2 305 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 CRBNQ96SW2 442 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 BOLA2Q9H3K6 86 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms