RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 DCAF15Q66K64 600 aa24.18■■□□□ 1.46
TSPAN3-210ENST00000561277 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
TSPAN3-210ENST00000561277 SLC10A4Q96EP9 437 aa24.18■■□□□ 1.46
TSPAN3-210ENST00000561277 CSRNP1Q96S65 589 aa24.18■■□□□ 1.46
TSPAN3-210ENST00000561277 MAP4K4O95819 1239 aaPredicted RBP24.17■■□□□ 1.46
TSPAN3-210ENST00000561277 PLCG2P16885 1265 aa24.17■■□□□ 1.46
TSPAN3-210ENST00000561277 SLC9C2Q5TAH2 1124 aa24.17■■□□□ 1.46
TSPAN3-210ENST00000561277 WRNIP1Q96S55 665 aa24.17■■□□□ 1.46
TSPAN3-210ENST00000561277 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
TSPAN3-210ENST00000561277 IGHDP01880 384 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 PDE6AP16499 860 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 PPP4CP60510 307 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 SH3BP5LQ7L8J4 393 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 DDTLA6NHG4 134 aaPredicted RBP24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 FOXN1O15353 648 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 ZNF341Q9BYN7 854 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 ELP3Q9H9T3 547 aa24.16■■□□□ 1.46
TSPAN3-210ENST00000561277 MAP3K9P80192 1104 aa24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 VGLL4Q14135 290 aa24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 TGFBRAP1Q8WUH2 860 aa24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 OSBPL5Q9H0X9 879 aaPredicted RBP24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 CSADQ9Y600 493 aa24.15■■□□□ 1.46
TSPAN3-210ENST00000561277 ZNF532Q9HCE3 1301 aa24.14■■□□□ 1.46
TSPAN3-210ENST00000561277 UNCXA6NJT0 531 aa24.14■■□□□ 1.45
TSPAN3-210ENST00000561277 SPRYD7Q5W111 196 aa24.14■■□□□ 1.45
TSPAN3-210ENST00000561277 B4GALNT3Q6L9W6 998 aa24.14■■□□□ 1.45
TSPAN3-210ENST00000561277 MAPKAPK5Q8IW41 473 aa24.14■■□□□ 1.45
TSPAN3-210ENST00000561277 ATRNL1Q5VV63 1379 aa24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 TTC41PQ6P2S7 1318 aa24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 NPM3O75607 178 aaKnown RBP24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 MX1P20591 662 aa24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 TMED8Q6PL24 325 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 ZKSCAN4Q969J2 545 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 WNK4Q96J92 1243 aa24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 CDK5RAP2Q96SN8 1893 aa24.13■■□□□ 1.45
TSPAN3-210ENST00000561277 FLT1P17948 1338 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 SLURP2P0DP57 97 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 SMC5Q8IY18 1101 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 INPP5BP32019 993 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 SLFNL1Q499Z3 407 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 OPTNQ96CV9 577 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 LNPKQ9C0E8 428 aa24.12■■□□□ 1.45
TSPAN3-210ENST00000561277 FOCADQ5VW36 1801 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 MAGEB6P1A0A0J9YX57 407 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 TCRBV5S4A2TA0A5A2 114 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 ERC2O15083 957 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 CHGBP05060 677 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 ADD2P35612 726 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 CERS3Q8IU89 383 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 PI4K2BQ8TCG2 481 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 CNKSR2Q8WXI2 1034 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 TSKSQ9UJT2 592 aa24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 COL2A1P02458 1487 aaPredicted RBP24.11■■□□□ 1.45
TSPAN3-210ENST00000561277 ZBTB48P10074 688 aaPredicted RBP24.1■■□□□ 1.45
TSPAN3-210ENST00000561277 GJA5P36382 358 aa24.1■■□□□ 1.45
TSPAN3-210ENST00000561277 RIOK1Q9BRS2 568 aaKnown RBP24.1■■□□□ 1.45
TSPAN3-210ENST00000561277 SNCAIPQ9Y6H5 919 aa24.1■■□□□ 1.45
TSPAN3-210ENST00000561277 SALL3Q9BXA9 1300 aa24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 FAM196BA6NMK8 535 aa24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 GLRX3O76003 335 aaKnown RBP24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 USP5P45974 858 aa24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 OTUD5Q96G74 571 aa24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 SAP30BPQ9UHR5 308 aaKnown RBP24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 MYH7P12883 1935 aa24.09■■□□□ 1.45
TSPAN3-210ENST00000561277 CTCFP49711 727 aaPredicted RBP24.08■■□□□ 1.45
TSPAN3-210ENST00000561277 SLC4A8Q2Y0W8 1093 aa24.08■■□□□ 1.45
TSPAN3-210ENST00000561277 ZSCAN25Q6NSZ9 544 aa24.08■■□□□ 1.44
TSPAN3-210ENST00000561277 REM2Q8IYK8 340 aaPredicted RBP24.08■■□□□ 1.44
TSPAN3-210ENST00000561277 KBTBD3Q8NAB2 608 aa24.08■■□□□ 1.44
TSPAN3-210ENST00000561277 ZNF112Q9UJU3 913 aa24.08■■□□□ 1.44
TSPAN3-210ENST00000561277 PALD1Q9ULE6 856 aa24.08■■□□□ 1.44
TSPAN3-210ENST00000561277 HSPA8P11142 646 aaKnown RBP24.07■■□□□ 1.44
TSPAN3-210ENST00000561277 SREBF2Q12772 1141 aa24.07■■□□□ 1.44
TSPAN3-210ENST00000561277 LCORLQ8N3X6 602 aa24.07■■□□□ 1.44
TSPAN3-210ENST00000561277 DHX36Q9H2U1 1008 aaKnown RBP24.07■■□□□ 1.44
TSPAN3-210ENST00000561277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.07■■□□□ 1.44
TSPAN3-210ENST00000561277 SPDYE5A6NIY4 337 aa24.06■■□□□ 1.44
TSPAN3-210ENST00000561277 CA12O43570 354 aa24.06■■□□□ 1.44
TSPAN3-210ENST00000561277 LBX1P52954 281 aa24.06■■□□□ 1.44
TSPAN3-210ENST00000561277 CHD1LQ86WJ1 897 aa24.06■■□□□ 1.44
TSPAN3-210ENST00000561277 ARMT1Q9H993 441 aa24.06■■□□□ 1.44
TSPAN3-210ENST00000561277 MANSC4A6NHS7 340 aaPredicted RBP24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 PHF20L1A8MW92 1017 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 TRPA1O75762 1119 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 MBD4O95243 580 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 PDE1AP54750 535 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 NUCB1Q02818 461 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 UBE3CQ15386 1083 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 ERO1BQ86YB8 467 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 CRNKL1Q9BZJ0 848 aaKnown RBP24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 RNF186Q9NXI6 227 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 PI4KBQ9UBF8 816 aa24.05■■□□□ 1.44
TSPAN3-210ENST00000561277 SIPA1L1O43166 1804 aa24.04■■□□□ 1.44
TSPAN3-210ENST00000561277 TBC1D12O60347 775 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 TM4SF4P48230 202 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 MAP3K10Q02779 954 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 SDR42E1Q8WUS8 393 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms