RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
TPM1-229ENST00000561242 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 PI4K2BQ8TCG2 481 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 CABP5Q9NP86 173 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
TPM1-229ENST00000561242 COL1A1P02452 1464 aaPredicted RBP12.82□□□□□ -0.36
TPM1-229ENST00000561242 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
TPM1-229ENST00000561242 OTUD7BQ6GQQ9 843 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
TPM1-229ENST00000561242 NAPBQ9H115 298 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
TPM1-229ENST00000561242 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
TPM1-229ENST00000561242 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
TPM1-229ENST00000561242 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 SCN4AP35499 1836 aa12.81□□□□□ -0.36
TPM1-229ENST00000561242 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 SDSP20132 328 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 RGMBQ6NW40 437 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 MKRN1Q9UHC7 482 aaKnown RBP12.8□□□□□ -0.36
TPM1-229ENST00000561242 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
TPM1-229ENST00000561242 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
TPM1-229ENST00000561242 GPAA1O43292 621 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
TPM1-229ENST00000561242 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
TPM1-229ENST00000561242 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
TPM1-229ENST00000561242 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
TPM1-229ENST00000561242 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
TPM1-229ENST00000561242 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
TPM1-229ENST00000561242 PDE4BQ07343 736 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 NFIAQ12857 509 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 PASKQ96RG2 1323 aa12.78□□□□□ -0.36
TPM1-229ENST00000561242 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
TPM1-229ENST00000561242 RHBDL3P58872 404 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 NOGQ13253 232 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 CST9Q5W186 159 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 SDR42E1Q8WUS8 393 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.37
TPM1-229ENST00000561242 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 FLT1P17948 1338 aa12.77□□□□□ -0.37
TPM1-229ENST00000561242 TCRBV5S4A2TA0A5A2 114 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 TBC1D12O60347 775 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 CTNND1O60716 968 aaKnown RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 INHBEP58166 350 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 NMIQ13287 307 aaPredicted RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 CERKLQ49MI3 558 aaPredicted RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 ADGRA1Q86SQ6 560 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 CAPNS2Q96L46 248 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 RIOK1Q9BRS2 568 aaKnown RBP12.76□□□□□ -0.37
TPM1-229ENST00000561242 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 GINM1Q9NU53 330 aa12.76□□□□□ -0.37
TPM1-229ENST00000561242 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 USP17L21D6R901 530 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 ZNF213O14771 459 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 CDC45O75419 566 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
TPM1-229ENST00000561242 PDE4AP27815 886 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPM1-229ENST00000561242 TRDNQ13061 729 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
TPM1-229ENST00000561242 RFX7Q2KHR2 1363 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 BMP2KLQ5H9B9 411 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 CCDC17Q96LX7 622 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
TPM1-229ENST00000561242 ELP3Q9H9T3 547 aa12.75□□□□□ -0.37
TPM1-229ENST00000561242 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
TPM1-229ENST00000561242 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
TPM1-229ENST00000561242 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
TPM1-229ENST00000561242 DDTLA6NHG4 134 aaPredicted RBP12.74□□□□□ -0.37
TPM1-229ENST00000561242 MANSC4A6NHS7 340 aaPredicted RBP12.74□□□□□ -0.37
TPM1-229ENST00000561242 PRKAB2O43741 272 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms